Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Msh4Q99MT2 Gm27502-201ENSMUST00000183495 199 ntBASIC21.41■■□□□ 1.02
Msh4Q99MT2 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Msh4Q99MT2 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Msh4Q99MT2 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Msh4Q99MT2 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Msh4Q99MT2 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Msh4Q99MT2 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Msh4Q99MT2 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.4■■□□□ 1.02
Msh4Q99MT2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.4■■□□□ 1.02
Msh4Q99MT2 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.4■■□□□ 1.02
Msh4Q99MT2 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Msh4Q99MT2 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Msh4Q99MT2 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.39■■□□□ 1.01
Msh4Q99MT2 Gm12366-201ENSMUST00000121722 873 ntBASIC21.39■■□□□ 1.01
Msh4Q99MT2 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.39■■□□□ 1.01
Msh4Q99MT2 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.39■■□□□ 1.01
Msh4Q99MT2 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.39■■□□□ 1.01
Msh4Q99MT2 Gm5786-201ENSMUST00000085368 882 ntBASIC21.39■■□□□ 1.01
Msh4Q99MT2 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Msh4Q99MT2 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.39■■□□□ 1.01
Msh4Q99MT2 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.39■■□□□ 1.01
Msh4Q99MT2 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Msh4Q99MT2 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Msh4Q99MT2 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Msh4Q99MT2 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Msh4Q99MT2 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Msh4Q99MT2 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.38■■□□□ 1.01
Msh4Q99MT2 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Msh4Q99MT2 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Msh4Q99MT2 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Msh4Q99MT2 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Msh4Q99MT2 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Msh4Q99MT2 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.37■■□□□ 1.01
Msh4Q99MT2 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Msh4Q99MT2 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Msh4Q99MT2 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Msh4Q99MT2 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Msh4Q99MT2 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.36■■□□□ 1.01
Msh4Q99MT2 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Msh4Q99MT2 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Msh4Q99MT2 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Msh4Q99MT2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Msh4Q99MT2 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Msh4Q99MT2 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Msh4Q99MT2 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Msh4Q99MT2 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Msh4Q99MT2 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.35■■□□□ 1.01
Msh4Q99MT2 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Msh4Q99MT2 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Msh4Q99MT2 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Msh4Q99MT2 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Msh4Q99MT2 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
Msh4Q99MT2 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Msh4Q99MT2 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.34■■□□□ 1.01
Msh4Q99MT2 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.34■■□□□ 1.01
Msh4Q99MT2 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.34■■□□□ 1.01
Msh4Q99MT2 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Msh4Q99MT2 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Msh4Q99MT2 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Msh4Q99MT2 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Msh4Q99MT2 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Msh4Q99MT2 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Msh4Q99MT2 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Msh4Q99MT2 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Msh4Q99MT2 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Msh4Q99MT2 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
Msh4Q99MT2 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Msh4Q99MT2 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
Msh4Q99MT2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Msh4Q99MT2 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Msh4Q99MT2 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.32■■□□□ 1
Msh4Q99MT2 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Msh4Q99MT2 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Msh4Q99MT2 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Msh4Q99MT2 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Msh4Q99MT2 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.31■■□□□ 1
Msh4Q99MT2 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.31■■□□□ 1
Msh4Q99MT2 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Msh4Q99MT2 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Msh4Q99MT2 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.31■■□□□ 1
Msh4Q99MT2 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Msh4Q99MT2 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Msh4Q99MT2 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Msh4Q99MT2 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
Msh4Q99MT2 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.3■■□□□ 1
Msh4Q99MT2 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Msh4Q99MT2 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Msh4Q99MT2 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Msh4Q99MT2 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Msh4Q99MT2 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Msh4Q99MT2 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Msh4Q99MT2 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Msh4Q99MT2 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Msh4Q99MT2 Gm14523-201ENSMUST00000117260 558 ntBASIC21.28■■□□□ 1
Msh4Q99MT2 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.28■■□□□ 1
Msh4Q99MT2 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.28■■□□□ 1
Msh4Q99MT2 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Msh4Q99MT2 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.27■■□□□ 1
Msh4Q99MT2 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.27■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms