Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Nkx6-1Q99MA9 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nkx6-1Q99MA9 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nkx6-1Q99MA9 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nkx6-1Q99MA9 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nkx6-1Q99MA9 Serp2-204ENSMUST00000228055 705 ntBASIC20.94■□□□□ 0.94
Nkx6-1Q99MA9 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nkx6-1Q99MA9 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Nkx6-1Q99MA9 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Nkx6-1Q99MA9 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.93■□□□□ 0.94
Nkx6-1Q99MA9 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nkx6-1Q99MA9 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.92■□□□□ 0.94
Nkx6-1Q99MA9 Gm7417-201ENSMUST00000192950 473 ntBASIC20.92■□□□□ 0.94
Nkx6-1Q99MA9 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Nkx6-1Q99MA9 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Nkx6-1Q99MA9 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nkx6-1Q99MA9 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nkx6-1Q99MA9 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nkx6-1Q99MA9 Gm13241-201ENSMUST00000094493 780 ntBASIC20.91■□□□□ 0.94
Nkx6-1Q99MA9 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nkx6-1Q99MA9 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nkx6-1Q99MA9 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Nkx6-1Q99MA9 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Nkx6-1Q99MA9 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nkx6-1Q99MA9 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Nkx6-1Q99MA9 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Nkx6-1Q99MA9 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.89■□□□□ 0.93
Nkx6-1Q99MA9 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.89■□□□□ 0.93
Nkx6-1Q99MA9 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Nkx6-1Q99MA9 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
Nkx6-1Q99MA9 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Nkx6-1Q99MA9 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nkx6-1Q99MA9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nkx6-1Q99MA9 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nkx6-1Q99MA9 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nkx6-1Q99MA9 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nkx6-1Q99MA9 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nkx6-1Q99MA9 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nkx6-1Q99MA9 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Nkx6-1Q99MA9 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.87■□□□□ 0.93
Nkx6-1Q99MA9 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nkx6-1Q99MA9 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nkx6-1Q99MA9 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nkx6-1Q99MA9 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Nkx6-1Q99MA9 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Nkx6-1Q99MA9 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.86■□□□□ 0.93
Nkx6-1Q99MA9 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nkx6-1Q99MA9 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nkx6-1Q99MA9 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.85■□□□□ 0.93
Nkx6-1Q99MA9 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nkx6-1Q99MA9 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nkx6-1Q99MA9 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nkx6-1Q99MA9 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Nkx6-1Q99MA9 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nkx6-1Q99MA9 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nkx6-1Q99MA9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nkx6-1Q99MA9 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nkx6-1Q99MA9 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Nkx6-1Q99MA9 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Nkx6-1Q99MA9 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Nkx6-1Q99MA9 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nkx6-1Q99MA9 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.82■□□□□ 0.92
Nkx6-1Q99MA9 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nkx6-1Q99MA9 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nkx6-1Q99MA9 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.82■□□□□ 0.92
Nkx6-1Q99MA9 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.82■□□□□ 0.92
Nkx6-1Q99MA9 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nkx6-1Q99MA9 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nkx6-1Q99MA9 Gm9847-201ENSMUST00000052528 599 ntBASIC20.82■□□□□ 0.92
Nkx6-1Q99MA9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nkx6-1Q99MA9 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nkx6-1Q99MA9 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.81■□□□□ 0.92
Nkx6-1Q99MA9 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Nkx6-1Q99MA9 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.81■□□□□ 0.92
Nkx6-1Q99MA9 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nkx6-1Q99MA9 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx6-1Q99MA9 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.8■□□□□ 0.92
Nkx6-1Q99MA9 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Nkx6-1Q99MA9 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Nkx6-1Q99MA9 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.8■□□□□ 0.92
Nkx6-1Q99MA9 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.8■□□□□ 0.92
Nkx6-1Q99MA9 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx6-1Q99MA9 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx6-1Q99MA9 Amer2-203ENSMUST00000225247 2662 ntBASIC20.79■□□□□ 0.92
Nkx6-1Q99MA9 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nkx6-1Q99MA9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.78■□□□□ 0.92
Nkx6-1Q99MA9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Nkx6-1Q99MA9 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nkx6-1Q99MA9 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nkx6-1Q99MA9 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Nkx6-1Q99MA9 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Nkx6-1Q99MA9 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.77■□□□□ 0.92
Nkx6-1Q99MA9 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.77■□□□□ 0.92
Nkx6-1Q99MA9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.77■□□□□ 0.92
Nkx6-1Q99MA9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.77■□□□□ 0.92
Nkx6-1Q99MA9 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.77■□□□□ 0.92
Nkx6-1Q99MA9 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.77■□□□□ 0.92
Nkx6-1Q99MA9 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Nkx6-1Q99MA9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Nkx6-1Q99MA9 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 119.9 ms