Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdca3Q99M54 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.36■□□□□ 0.85
Cdca3Q99M54 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdca3Q99M54 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdca3Q99M54 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdca3Q99M54 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdca3Q99M54 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cdca3Q99M54 Gm5921-201ENSMUST00000075898 882 ntBASIC20.35■□□□□ 0.85
Cdca3Q99M54 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
Cdca3Q99M54 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdca3Q99M54 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdca3Q99M54 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdca3Q99M54 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdca3Q99M54 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdca3Q99M54 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdca3Q99M54 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Cdca3Q99M54 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cdca3Q99M54 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Cdca3Q99M54 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cdca3Q99M54 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cdca3Q99M54 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Cdca3Q99M54 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdca3Q99M54 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdca3Q99M54 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Cdca3Q99M54 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cdca3Q99M54 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.33■□□□□ 0.84
Cdca3Q99M54 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdca3Q99M54 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cdca3Q99M54 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdca3Q99M54 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdca3Q99M54 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Cdca3Q99M54 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdca3Q99M54 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.31■□□□□ 0.84
Cdca3Q99M54 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdca3Q99M54 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.31■□□□□ 0.84
Cdca3Q99M54 Gm15546-201ENSMUST00000122095 826 ntBASIC20.31■□□□□ 0.84
Cdca3Q99M54 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdca3Q99M54 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdca3Q99M54 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdca3Q99M54 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cdca3Q99M54 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cdca3Q99M54 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cdca3Q99M54 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Cdca3Q99M54 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.29■□□□□ 0.84
Cdca3Q99M54 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdca3Q99M54 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Cdca3Q99M54 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdca3Q99M54 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Cdca3Q99M54 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Cdca3Q99M54 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.28■□□□□ 0.84
Cdca3Q99M54 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Cdca3Q99M54 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.28■□□□□ 0.84
Cdca3Q99M54 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdca3Q99M54 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdca3Q99M54 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cdca3Q99M54 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Cdca3Q99M54 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.84
Cdca3Q99M54 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdca3Q99M54 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdca3Q99M54 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Cdca3Q99M54 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.27■□□□□ 0.84
Cdca3Q99M54 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cdca3Q99M54 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.27■□□□□ 0.84
Cdca3Q99M54 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
Cdca3Q99M54 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdca3Q99M54 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cdca3Q99M54 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cdca3Q99M54 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cdca3Q99M54 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdca3Q99M54 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cdca3Q99M54 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdca3Q99M54 Gm9812-201ENSMUST00000061934 968 ntBASIC20.26■□□□□ 0.83
Cdca3Q99M54 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdca3Q99M54 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Cdca3Q99M54 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cdca3Q99M54 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Cdca3Q99M54 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.24■□□□□ 0.83
Cdca3Q99M54 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdca3Q99M54 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdca3Q99M54 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdca3Q99M54 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdca3Q99M54 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdca3Q99M54 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.22■□□□□ 0.83
Cdca3Q99M54 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cdca3Q99M54 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.22■□□□□ 0.83
Cdca3Q99M54 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Cdca3Q99M54 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Cdca3Q99M54 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdca3Q99M54 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdca3Q99M54 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cdca3Q99M54 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdca3Q99M54 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Cdca3Q99M54 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdca3Q99M54 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.21■□□□□ 0.83
Cdca3Q99M54 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.21■□□□□ 0.83
Cdca3Q99M54 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cdca3Q99M54 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.21■□□□□ 0.83
Cdca3Q99M54 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdca3Q99M54 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cdca3Q99M54 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms