Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdha2Q91Y17 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC23.84■■□□□ 1.41
Pcdha2Q91Y17 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Pcdha2Q91Y17 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdha2Q91Y17 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdha2Q91Y17 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdha2Q91Y17 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdha2Q91Y17 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
Pcdha2Q91Y17 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdha2Q91Y17 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdha2Q91Y17 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Pcdha2Q91Y17 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdha2Q91Y17 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdha2Q91Y17 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.82■■□□□ 1.4
Pcdha2Q91Y17 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdha2Q91Y17 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdha2Q91Y17 Gm6934-201ENSMUST00000194780 1905 ntBASIC23.82■■□□□ 1.4
Pcdha2Q91Y17 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdha2Q91Y17 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdha2Q91Y17 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC23.81■■□□□ 1.4
Pcdha2Q91Y17 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdha2Q91Y17 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdha2Q91Y17 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Pcdha2Q91Y17 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdha2Q91Y17 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Pcdha2Q91Y17 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdha2Q91Y17 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC23.79■■□□□ 1.4
Pcdha2Q91Y17 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdha2Q91Y17 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdha2Q91Y17 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdha2Q91Y17 AC153524.1-201ENSMUST00000220436 1935 ntBASIC23.78■■□□□ 1.4
Pcdha2Q91Y17 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC23.78■■□□□ 1.4
Pcdha2Q91Y17 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdha2Q91Y17 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdha2Q91Y17 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdha2Q91Y17 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdha2Q91Y17 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdha2Q91Y17 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdha2Q91Y17 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdha2Q91Y17 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Pcdha2Q91Y17 Gm28731-201ENSMUST00000185564 1569 ntBASIC23.76■■□□□ 1.39
Pcdha2Q91Y17 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdha2Q91Y17 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdha2Q91Y17 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdha2Q91Y17 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdha2Q91Y17 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC23.74■■□□□ 1.39
Pcdha2Q91Y17 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdha2Q91Y17 Gm10420-201ENSMUST00000121713 882 ntBASIC23.73■■□□□ 1.39
Pcdha2Q91Y17 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC23.73■■□□□ 1.39
Pcdha2Q91Y17 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdha2Q91Y17 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdha2Q91Y17 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdha2Q91Y17 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdha2Q91Y17 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdha2Q91Y17 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Pcdha2Q91Y17 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdha2Q91Y17 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
Pcdha2Q91Y17 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdha2Q91Y17 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdha2Q91Y17 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdha2Q91Y17 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC23.71■■□□□ 1.39
Pcdha2Q91Y17 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdha2Q91Y17 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC23.71■■□□□ 1.39
Pcdha2Q91Y17 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.39
Pcdha2Q91Y17 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdha2Q91Y17 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdha2Q91Y17 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdha2Q91Y17 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC23.7■■□□□ 1.38
Pcdha2Q91Y17 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdha2Q91Y17 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdha2Q91Y17 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdha2Q91Y17 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdha2Q91Y17 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdha2Q91Y17 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdha2Q91Y17 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdha2Q91Y17 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdha2Q91Y17 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdha2Q91Y17 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
Pcdha2Q91Y17 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdha2Q91Y17 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
Pcdha2Q91Y17 AC117245.4-201ENSMUST00000217388 1646 ntBASIC23.66■■□□□ 1.38
Pcdha2Q91Y17 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdha2Q91Y17 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdha2Q91Y17 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC23.66■■□□□ 1.38
Pcdha2Q91Y17 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdha2Q91Y17 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Pcdha2Q91Y17 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
Pcdha2Q91Y17 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdha2Q91Y17 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdha2Q91Y17 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdha2Q91Y17 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdha2Q91Y17 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdha2Q91Y17 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC23.65■■□□□ 1.38
Pcdha2Q91Y17 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
Pcdha2Q91Y17 H3f3aos-201ENSMUST00000097448 2905 ntBASIC23.64■■□□□ 1.38
Pcdha2Q91Y17 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Pcdha2Q91Y17 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Pcdha2Q91Y17 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdha2Q91Y17 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdha2Q91Y17 Gm43592-201ENSMUST00000196922 1165 ntBASIC23.64■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 105.4 ms