Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhb18Q91Y02 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhb18Q91Y02 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC23.17■■□□□ 1.3
Pcdhb18Q91Y02 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhb18Q91Y02 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Pcdhb18Q91Y02 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdhb18Q91Y02 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdhb18Q91Y02 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Pcdhb18Q91Y02 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdhb18Q91Y02 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhb18Q91Y02 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
Pcdhb18Q91Y02 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC23.15■■□□□ 1.3
Pcdhb18Q91Y02 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Pcdhb18Q91Y02 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Pcdhb18Q91Y02 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhb18Q91Y02 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Pcdhb18Q91Y02 Rps24-207ENSMUST00000224568 714 ntBASIC23.14■■□□□ 1.29
Pcdhb18Q91Y02 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdhb18Q91Y02 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdhb18Q91Y02 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdhb18Q91Y02 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdhb18Q91Y02 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdhb18Q91Y02 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdhb18Q91Y02 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhb18Q91Y02 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhb18Q91Y02 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Pcdhb18Q91Y02 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Pcdhb18Q91Y02 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Pcdhb18Q91Y02 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhb18Q91Y02 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhb18Q91Y02 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhb18Q91Y02 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhb18Q91Y02 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
Pcdhb18Q91Y02 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhb18Q91Y02 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhb18Q91Y02 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhb18Q91Y02 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhb18Q91Y02 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhb18Q91Y02 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC23.09■■□□□ 1.29
Pcdhb18Q91Y02 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhb18Q91Y02 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhb18Q91Y02 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhb18Q91Y02 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
Pcdhb18Q91Y02 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC23.08■■□□□ 1.29
Pcdhb18Q91Y02 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhb18Q91Y02 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhb18Q91Y02 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
Pcdhb18Q91Y02 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Pcdhb18Q91Y02 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC23.08■■□□□ 1.28
Pcdhb18Q91Y02 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC23.08■■□□□ 1.28
Pcdhb18Q91Y02 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdhb18Q91Y02 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdhb18Q91Y02 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdhb18Q91Y02 Gm42501-201ENSMUST00000200220 1026 ntBASIC23.07■■□□□ 1.28
Pcdhb18Q91Y02 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Pcdhb18Q91Y02 AC164433.2-201ENSMUST00000226346 1701 ntBASIC23.07■■□□□ 1.28
Pcdhb18Q91Y02 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC23.07■■□□□ 1.28
Pcdhb18Q91Y02 Gm15039-201ENSMUST00000118914 875 ntBASIC23.06■■□□□ 1.28
Pcdhb18Q91Y02 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Pcdhb18Q91Y02 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Pcdhb18Q91Y02 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Pcdhb18Q91Y02 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhb18Q91Y02 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC23.05■■□□□ 1.28
Pcdhb18Q91Y02 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Pcdhb18Q91Y02 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhb18Q91Y02 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhb18Q91Y02 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Pcdhb18Q91Y02 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdhb18Q91Y02 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Pcdhb18Q91Y02 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhb18Q91Y02 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC23.03■■□□□ 1.28
Pcdhb18Q91Y02 Gm45102-201ENSMUST00000207427 857 ntBASIC23.03■■□□□ 1.28
Pcdhb18Q91Y02 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhb18Q91Y02 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhb18Q91Y02 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhb18Q91Y02 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Pcdhb18Q91Y02 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC23.02■■□□□ 1.28
Pcdhb18Q91Y02 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Pcdhb18Q91Y02 Gm18755-201ENSMUST00000218030 1099 ntBASIC23.02■■□□□ 1.28
Pcdhb18Q91Y02 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhb18Q91Y02 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhb18Q91Y02 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Pcdhb18Q91Y02 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdhb18Q91Y02 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Pcdhb18Q91Y02 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhb18Q91Y02 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23■■□□□ 1.27
Pcdhb18Q91Y02 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC23■■□□□ 1.27
Pcdhb18Q91Y02 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhb18Q91Y02 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhb18Q91Y02 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdhb18Q91Y02 Gm7199-201ENSMUST00000118327 1485 ntBASIC22.99■■□□□ 1.27
Pcdhb18Q91Y02 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdhb18Q91Y02 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdhb18Q91Y02 Gm14117-201ENSMUST00000122417 843 ntBASIC22.99■■□□□ 1.27
Pcdhb18Q91Y02 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdhb18Q91Y02 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdhb18Q91Y02 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdhb18Q91Y02 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdhb18Q91Y02 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC22.98■■□□□ 1.27
Pcdhb18Q91Y02 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms