Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhb6Q91XZ4 Gm11687-201ENSMUST00000118911 886 ntBASIC22.82■■□□□ 1.24
Pcdhb6Q91XZ4 AC151971.4-201ENSMUST00000214717 704 ntBASIC22.82■■□□□ 1.24
Pcdhb6Q91XZ4 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhb6Q91XZ4 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
Pcdhb6Q91XZ4 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhb6Q91XZ4 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdhb6Q91XZ4 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
Pcdhb6Q91XZ4 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.8■■□□□ 1.24
Pcdhb6Q91XZ4 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC22.8■■□□□ 1.24
Pcdhb6Q91XZ4 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdhb6Q91XZ4 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pcdhb6Q91XZ4 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC22.79■■□□□ 1.24
Pcdhb6Q91XZ4 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pcdhb6Q91XZ4 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdhb6Q91XZ4 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.78■■□□□ 1.24
Pcdhb6Q91XZ4 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdhb6Q91XZ4 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdhb6Q91XZ4 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdhb6Q91XZ4 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.77■■□□□ 1.24
Pcdhb6Q91XZ4 Gm11175-201ENSMUST00000116172 543 ntBASIC22.77■■□□□ 1.24
Pcdhb6Q91XZ4 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC22.77■■□□□ 1.24
Pcdhb6Q91XZ4 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Pcdhb6Q91XZ4 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdhb6Q91XZ4 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Pcdhb6Q91XZ4 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.76■■□□□ 1.23
Pcdhb6Q91XZ4 AC153524.1-201ENSMUST00000220436 1935 ntBASIC22.76■■□□□ 1.23
Pcdhb6Q91XZ4 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
Pcdhb6Q91XZ4 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdhb6Q91XZ4 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
Pcdhb6Q91XZ4 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Pcdhb6Q91XZ4 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC22.73■■□□□ 1.23
Pcdhb6Q91XZ4 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Pcdhb6Q91XZ4 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC22.73■■□□□ 1.23
Pcdhb6Q91XZ4 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhb6Q91XZ4 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
Pcdhb6Q91XZ4 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Pcdhb6Q91XZ4 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhb6Q91XZ4 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhb6Q91XZ4 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.72■■□□□ 1.23
Pcdhb6Q91XZ4 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhb6Q91XZ4 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdhb6Q91XZ4 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdhb6Q91XZ4 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
Pcdhb6Q91XZ4 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pcdhb6Q91XZ4 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhb6Q91XZ4 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhb6Q91XZ4 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhb6Q91XZ4 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhb6Q91XZ4 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhb6Q91XZ4 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhb6Q91XZ4 Gm22567-201ENSMUST00000175542 342 ntBASIC22.68■■□□□ 1.22
Pcdhb6Q91XZ4 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhb6Q91XZ4 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhb6Q91XZ4 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhb6Q91XZ4 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC22.67■■□□□ 1.22
Pcdhb6Q91XZ4 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhb6Q91XZ4 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhb6Q91XZ4 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhb6Q91XZ4 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhb6Q91XZ4 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhb6Q91XZ4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhb6Q91XZ4 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhb6Q91XZ4 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhb6Q91XZ4 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhb6Q91XZ4 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhb6Q91XZ4 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Pcdhb6Q91XZ4 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
Pcdhb6Q91XZ4 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhb6Q91XZ4 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Pcdhb6Q91XZ4 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhb6Q91XZ4 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhb6Q91XZ4 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhb6Q91XZ4 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhb6Q91XZ4 AC117245.4-201ENSMUST00000217388 1646 ntBASIC22.64■■□□□ 1.22
Pcdhb6Q91XZ4 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
Pcdhb6Q91XZ4 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
Pcdhb6Q91XZ4 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Pcdhb6Q91XZ4 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
Pcdhb6Q91XZ4 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
Pcdhb6Q91XZ4 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhb6Q91XZ4 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhb6Q91XZ4 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhb6Q91XZ4 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhb6Q91XZ4 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhb6Q91XZ4 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Pcdhb6Q91XZ4 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.63■■□□□ 1.21
Pcdhb6Q91XZ4 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhb6Q91XZ4 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhb6Q91XZ4 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhb6Q91XZ4 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Pcdhb6Q91XZ4 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhb6Q91XZ4 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhb6Q91XZ4 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhb6Q91XZ4 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhb6Q91XZ4 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhb6Q91XZ4 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhb6Q91XZ4 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhb6Q91XZ4 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhb6Q91XZ4 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms