Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb8Q91XZ2 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.55■■□□□ 1.04
Pcdhb8Q91XZ2 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb8Q91XZ2 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Pcdhb8Q91XZ2 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.55■■□□□ 1.04
Pcdhb8Q91XZ2 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb8Q91XZ2 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb8Q91XZ2 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb8Q91XZ2 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.54■■□□□ 1.04
Pcdhb8Q91XZ2 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.54■■□□□ 1.04
Pcdhb8Q91XZ2 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb8Q91XZ2 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.54■■□□□ 1.04
Pcdhb8Q91XZ2 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb8Q91XZ2 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Pcdhb8Q91XZ2 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb8Q91XZ2 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.53■■□□□ 1.04
Pcdhb8Q91XZ2 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb8Q91XZ2 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Pcdhb8Q91XZ2 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Pcdhb8Q91XZ2 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb8Q91XZ2 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.52■■□□□ 1.04
Pcdhb8Q91XZ2 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
Pcdhb8Q91XZ2 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb8Q91XZ2 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb8Q91XZ2 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb8Q91XZ2 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Pcdhb8Q91XZ2 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhb8Q91XZ2 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhb8Q91XZ2 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhb8Q91XZ2 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Pcdhb8Q91XZ2 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb8Q91XZ2 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb8Q91XZ2 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb8Q91XZ2 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb8Q91XZ2 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.49■■□□□ 1.03
Pcdhb8Q91XZ2 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Pcdhb8Q91XZ2 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.49■■□□□ 1.03
Pcdhb8Q91XZ2 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.48■■□□□ 1.03
Pcdhb8Q91XZ2 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.48■■□□□ 1.03
Pcdhb8Q91XZ2 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.48■■□□□ 1.03
Pcdhb8Q91XZ2 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Pcdhb8Q91XZ2 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb8Q91XZ2 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb8Q91XZ2 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb8Q91XZ2 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb8Q91XZ2 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.47■■□□□ 1.03
Pcdhb8Q91XZ2 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb8Q91XZ2 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb8Q91XZ2 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb8Q91XZ2 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb8Q91XZ2 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb8Q91XZ2 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb8Q91XZ2 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.46■■□□□ 1.03
Pcdhb8Q91XZ2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb8Q91XZ2 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb8Q91XZ2 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb8Q91XZ2 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb8Q91XZ2 Scarna2-201ENSMUST00000157560 414 ntBASIC21.45■■□□□ 1.02
Pcdhb8Q91XZ2 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Pcdhb8Q91XZ2 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb8Q91XZ2 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb8Q91XZ2 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb8Q91XZ2 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb8Q91XZ2 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Pcdhb8Q91XZ2 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb8Q91XZ2 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Pcdhb8Q91XZ2 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.44■■□□□ 1.02
Pcdhb8Q91XZ2 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb8Q91XZ2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb8Q91XZ2 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.44■■□□□ 1.02
Pcdhb8Q91XZ2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb8Q91XZ2 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Pcdhb8Q91XZ2 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb8Q91XZ2 Gm9806-201ENSMUST00000051080 552 ntBASIC21.43■■□□□ 1.02
Pcdhb8Q91XZ2 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb8Q91XZ2 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb8Q91XZ2 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhb8Q91XZ2 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Pcdhb8Q91XZ2 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
Pcdhb8Q91XZ2 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb8Q91XZ2 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.42■■□□□ 1.02
Pcdhb8Q91XZ2 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb8Q91XZ2 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.42■■□□□ 1.02
Pcdhb8Q91XZ2 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb8Q91XZ2 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Pcdhb8Q91XZ2 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhb8Q91XZ2 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb8Q91XZ2 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb8Q91XZ2 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Pcdhb8Q91XZ2 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Pcdhb8Q91XZ2 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb8Q91XZ2 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhb8Q91XZ2 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb8Q91XZ2 Gm16437-201ENSMUST00000025669 507 ntBASIC21.4■■□□□ 1.02
Pcdhb8Q91XZ2 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhb8Q91XZ2 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhb8Q91XZ2 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhb8Q91XZ2 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.39■■□□□ 1.01
Pcdhb8Q91XZ2 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Pcdhb8Q91XZ2 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms