Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
Pcdhgc3Q91XX1 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhgc3Q91XX1 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Pcdhgc3Q91XX1 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhgc3Q91XX1 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhgc3Q91XX1 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Pcdhgc3Q91XX1 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhgc3Q91XX1 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdhgc3Q91XX1 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.92
Pcdhgc3Q91XX1 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhgc3Q91XX1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.82■□□□□ 0.92
Pcdhgc3Q91XX1 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Pcdhgc3Q91XX1 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Pcdhgc3Q91XX1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhgc3Q91XX1 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Pcdhgc3Q91XX1 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhgc3Q91XX1 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhgc3Q91XX1 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhgc3Q91XX1 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhgc3Q91XX1 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhgc3Q91XX1 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.8■□□□□ 0.92
Pcdhgc3Q91XX1 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhgc3Q91XX1 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
Pcdhgc3Q91XX1 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhgc3Q91XX1 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhgc3Q91XX1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhgc3Q91XX1 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhgc3Q91XX1 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhgc3Q91XX1 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhgc3Q91XX1 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.79■□□□□ 0.92
Pcdhgc3Q91XX1 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.78■□□□□ 0.92
Pcdhgc3Q91XX1 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhgc3Q91XX1 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhgc3Q91XX1 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.78■□□□□ 0.92
Pcdhgc3Q91XX1 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.78■□□□□ 0.92
Pcdhgc3Q91XX1 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Pcdhgc3Q91XX1 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhgc3Q91XX1 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhgc3Q91XX1 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhgc3Q91XX1 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Pcdhgc3Q91XX1 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Pcdhgc3Q91XX1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhgc3Q91XX1 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhgc3Q91XX1 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhgc3Q91XX1 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhgc3Q91XX1 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
Pcdhgc3Q91XX1 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhgc3Q91XX1 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.75■□□□□ 0.91
Pcdhgc3Q91XX1 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.75■□□□□ 0.91
Pcdhgc3Q91XX1 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhgc3Q91XX1 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.75■□□□□ 0.91
Pcdhgc3Q91XX1 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhgc3Q91XX1 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhgc3Q91XX1 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhgc3Q91XX1 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhgc3Q91XX1 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhgc3Q91XX1 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhgc3Q91XX1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhgc3Q91XX1 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhgc3Q91XX1 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhgc3Q91XX1 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhgc3Q91XX1 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhgc3Q91XX1 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhgc3Q91XX1 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhgc3Q91XX1 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhgc3Q91XX1 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhgc3Q91XX1 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Pcdhgc3Q91XX1 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.72■□□□□ 0.91
Pcdhgc3Q91XX1 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhgc3Q91XX1 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhgc3Q91XX1 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.72■□□□□ 0.91
Pcdhgc3Q91XX1 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhgc3Q91XX1 Notumos-201ENSMUST00000151998 2659 ntBASIC20.71■□□□□ 0.91
Pcdhgc3Q91XX1 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhgc3Q91XX1 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
Pcdhgc3Q91XX1 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhgc3Q91XX1 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhgc3Q91XX1 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhgc3Q91XX1 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.7■□□□□ 0.9
Pcdhgc3Q91XX1 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.7■□□□□ 0.9
Pcdhgc3Q91XX1 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhgc3Q91XX1 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhgc3Q91XX1 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhgc3Q91XX1 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhgc3Q91XX1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhgc3Q91XX1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhgc3Q91XX1 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhgc3Q91XX1 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.68■□□□□ 0.9
Pcdhgc3Q91XX1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.68■□□□□ 0.9
Pcdhgc3Q91XX1 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhgc3Q91XX1 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhgc3Q91XX1 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhgc3Q91XX1 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhgc3Q91XX1 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhgc3Q91XX1 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhgc3Q91XX1 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhgc3Q91XX1 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhgc3Q91XX1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.67■□□□□ 0.9
Pcdhgc3Q91XX1 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhgc3Q91XX1 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms