Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC25.24■■□□□ 1.63
Pcdhgc5Q91XW9 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Pcdhgc5Q91XW9 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC25.24■■□□□ 1.63
Pcdhgc5Q91XW9 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Pcdhgc5Q91XW9 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Pcdhgc5Q91XW9 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Pcdhgc5Q91XW9 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC25.23■■□□□ 1.63
Pcdhgc5Q91XW9 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Pcdhgc5Q91XW9 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC25.21■■□□□ 1.63
Pcdhgc5Q91XW9 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Pcdhgc5Q91XW9 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
Pcdhgc5Q91XW9 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Pcdhgc5Q91XW9 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC25.21■■□□□ 1.63
Pcdhgc5Q91XW9 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Pcdhgc5Q91XW9 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Pcdhgc5Q91XW9 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
Pcdhgc5Q91XW9 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Pcdhgc5Q91XW9 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC25.2■■□□□ 1.62
Pcdhgc5Q91XW9 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Pcdhgc5Q91XW9 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Pcdhgc5Q91XW9 Gm43592-201ENSMUST00000196922 1165 ntBASIC25.2■■□□□ 1.62
Pcdhgc5Q91XW9 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Pcdhgc5Q91XW9 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Pcdhgc5Q91XW9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Pcdhgc5Q91XW9 Gm43566-201ENSMUST00000196851 808 ntBASIC25.19■■□□□ 1.62
Pcdhgc5Q91XW9 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
Pcdhgc5Q91XW9 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Pcdhgc5Q91XW9 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
Pcdhgc5Q91XW9 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
Pcdhgc5Q91XW9 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Pcdhgc5Q91XW9 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Pcdhgc5Q91XW9 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
Pcdhgc5Q91XW9 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Pcdhgc5Q91XW9 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Pcdhgc5Q91XW9 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
Pcdhgc5Q91XW9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
Pcdhgc5Q91XW9 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Pcdhgc5Q91XW9 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Pcdhgc5Q91XW9 Gm14117-201ENSMUST00000122417 843 ntBASIC25.17■■□□□ 1.62
Pcdhgc5Q91XW9 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC25.16■■□□□ 1.62
Pcdhgc5Q91XW9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC25.16■■□□□ 1.62
Pcdhgc5Q91XW9 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdhgc5Q91XW9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdhgc5Q91XW9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC25.16■■□□□ 1.62
Pcdhgc5Q91XW9 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdhgc5Q91XW9 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdhgc5Q91XW9 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC25.15■■□□□ 1.62
Pcdhgc5Q91XW9 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Pcdhgc5Q91XW9 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC25.15■■□□□ 1.62
Pcdhgc5Q91XW9 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Pcdhgc5Q91XW9 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Pcdhgc5Q91XW9 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
Pcdhgc5Q91XW9 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Pcdhgc5Q91XW9 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Pcdhgc5Q91XW9 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Pcdhgc5Q91XW9 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
Pcdhgc5Q91XW9 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
Pcdhgc5Q91XW9 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Pcdhgc5Q91XW9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC25.13■■□□□ 1.61
Pcdhgc5Q91XW9 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Pcdhgc5Q91XW9 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Pcdhgc5Q91XW9 Gm45102-201ENSMUST00000207427 857 ntBASIC25.12■■□□□ 1.61
Pcdhgc5Q91XW9 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
Pcdhgc5Q91XW9 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Pcdhgc5Q91XW9 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC25.11■■□□□ 1.61
Pcdhgc5Q91XW9 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Pcdhgc5Q91XW9 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Pcdhgc5Q91XW9 Gm45444-201ENSMUST00000211394 898 ntBASIC25.11■■□□□ 1.61
Pcdhgc5Q91XW9 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
Pcdhgc5Q91XW9 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Pcdhgc5Q91XW9 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Pcdhgc5Q91XW9 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC25.09■■□□□ 1.61
Pcdhgc5Q91XW9 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Pcdhgc5Q91XW9 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
Pcdhgc5Q91XW9 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC25.09■■□□□ 1.61
Pcdhgc5Q91XW9 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC25.09■■□□□ 1.61
Pcdhgc5Q91XW9 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Pcdhgc5Q91XW9 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Pcdhgc5Q91XW9 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pcdhgc5Q91XW9 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Pcdhgc5Q91XW9 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pcdhgc5Q91XW9 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pcdhgc5Q91XW9 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Pcdhgc5Q91XW9 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Pcdhgc5Q91XW9 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Pcdhgc5Q91XW9 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Pcdhgc5Q91XW9 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Pcdhgc5Q91XW9 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC25.05■■□□□ 1.6
Pcdhgc5Q91XW9 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Pcdhgc5Q91XW9 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC25.05■■□□□ 1.6
Pcdhgc5Q91XW9 Gm9959-201ENSMUST00000068277 390 ntBASIC25.05■■□□□ 1.6
Pcdhgc5Q91XW9 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Pcdhgc5Q91XW9 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Pcdhgc5Q91XW9 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Pcdhgc5Q91XW9 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Pcdhgc5Q91XW9 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Pcdhgc5Q91XW9 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Pcdhgc5Q91XW9 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC25.04■■□□□ 1.6
Pcdhgc5Q91XW9 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Pcdhgc5Q91XW9 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC25.04■■□□□ 1.6
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms