Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC27.55■■■□□ 2
StrcQ8VIM6 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC27.55■■■□□ 2
StrcQ8VIM6 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC27.54■■■□□ 2
StrcQ8VIM6 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
StrcQ8VIM6 Serp2-204ENSMUST00000228055 705 ntBASIC27.54■■■□□ 2
StrcQ8VIM6 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
StrcQ8VIM6 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
StrcQ8VIM6 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
StrcQ8VIM6 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
StrcQ8VIM6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
StrcQ8VIM6 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
StrcQ8VIM6 Gm6206-201ENSMUST00000133472 2199 ntBASIC27.49■■□□□ 1.99
StrcQ8VIM6 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
StrcQ8VIM6 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC27.49■■□□□ 1.99
StrcQ8VIM6 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
StrcQ8VIM6 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC27.48■■□□□ 1.99
StrcQ8VIM6 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC27.48■■□□□ 1.99
StrcQ8VIM6 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
StrcQ8VIM6 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
StrcQ8VIM6 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC27.48■■□□□ 1.99
StrcQ8VIM6 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
StrcQ8VIM6 Gm13241-201ENSMUST00000094493 780 ntBASIC27.47■■□□□ 1.99
StrcQ8VIM6 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
StrcQ8VIM6 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC27.46■■□□□ 1.99
StrcQ8VIM6 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC27.46■■□□□ 1.99
StrcQ8VIM6 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC27.46■■□□□ 1.99
StrcQ8VIM6 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
StrcQ8VIM6 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
StrcQ8VIM6 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC27.45■■□□□ 1.99
StrcQ8VIM6 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC27.45■■□□□ 1.98
StrcQ8VIM6 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.98
StrcQ8VIM6 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC27.44■■□□□ 1.98
StrcQ8VIM6 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC27.44■■□□□ 1.98
StrcQ8VIM6 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC27.43■■□□□ 1.98
StrcQ8VIM6 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC27.42■■□□□ 1.98
StrcQ8VIM6 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC27.41■■□□□ 1.98
StrcQ8VIM6 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
StrcQ8VIM6 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
StrcQ8VIM6 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
StrcQ8VIM6 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
StrcQ8VIM6 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC27.4■■□□□ 1.98
StrcQ8VIM6 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
StrcQ8VIM6 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC27.4■■□□□ 1.98
StrcQ8VIM6 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC27.39■■□□□ 1.98
StrcQ8VIM6 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
StrcQ8VIM6 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC27.39■■□□□ 1.98
StrcQ8VIM6 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
StrcQ8VIM6 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
StrcQ8VIM6 Gm16464-201ENSMUST00000117815 1095 ntBASIC27.39■■□□□ 1.97
StrcQ8VIM6 Gm22238-201ENSMUST00000175222 88 ntBASIC27.39■■□□□ 1.97
StrcQ8VIM6 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC27.39■■□□□ 1.97
StrcQ8VIM6 Gm7199-201ENSMUST00000118327 1485 ntBASIC27.38■■□□□ 1.97
StrcQ8VIM6 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
StrcQ8VIM6 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC27.37■■□□□ 1.97
StrcQ8VIM6 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
StrcQ8VIM6 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
StrcQ8VIM6 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
StrcQ8VIM6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
StrcQ8VIM6 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
StrcQ8VIM6 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
StrcQ8VIM6 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC27.36■■□□□ 1.97
StrcQ8VIM6 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
StrcQ8VIM6 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
StrcQ8VIM6 Gm43034-201ENSMUST00000198678 1364 ntBASIC27.35■■□□□ 1.97
StrcQ8VIM6 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
StrcQ8VIM6 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
StrcQ8VIM6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
StrcQ8VIM6 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
StrcQ8VIM6 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
StrcQ8VIM6 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
StrcQ8VIM6 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
StrcQ8VIM6 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
StrcQ8VIM6 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
StrcQ8VIM6 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
StrcQ8VIM6 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
StrcQ8VIM6 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC27.32■■□□□ 1.96
StrcQ8VIM6 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
StrcQ8VIM6 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
StrcQ8VIM6 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
StrcQ8VIM6 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC27.31■■□□□ 1.96
StrcQ8VIM6 Amer2-203ENSMUST00000225247 2662 ntBASIC27.31■■□□□ 1.96
StrcQ8VIM6 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
StrcQ8VIM6 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
StrcQ8VIM6 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
StrcQ8VIM6 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC27.3■■□□□ 1.96
StrcQ8VIM6 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
StrcQ8VIM6 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
StrcQ8VIM6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
StrcQ8VIM6 Gm9847-201ENSMUST00000052528 599 ntBASIC27.3■■□□□ 1.96
StrcQ8VIM6 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC27.29■■□□□ 1.96
StrcQ8VIM6 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
StrcQ8VIM6 Gm7417-201ENSMUST00000192950 473 ntBASIC27.29■■□□□ 1.96
StrcQ8VIM6 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC27.29■■□□□ 1.96
StrcQ8VIM6 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
StrcQ8VIM6 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC27.28■■□□□ 1.96
StrcQ8VIM6 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC27.28■■□□□ 1.96
StrcQ8VIM6 AC164433.2-201ENSMUST00000226346 1701 ntBASIC27.28■■□□□ 1.96
StrcQ8VIM6 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
StrcQ8VIM6 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC27.27■■□□□ 1.96
StrcQ8VIM6 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms