Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
TraipQ8VIG6 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
TraipQ8VIG6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
TraipQ8VIG6 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TraipQ8VIG6 Gm42699-201ENSMUST00000198104 1657 ntBASIC23.77■■□□□ 1.4
TraipQ8VIG6 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
TraipQ8VIG6 Gm5522-201ENSMUST00000189483 1242 ntBASIC23.77■■□□□ 1.4
TraipQ8VIG6 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC23.77■■□□□ 1.4
TraipQ8VIG6 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
TraipQ8VIG6 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC23.77■■□□□ 1.4
TraipQ8VIG6 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC23.76■■□□□ 1.39
TraipQ8VIG6 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TraipQ8VIG6 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TraipQ8VIG6 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
TraipQ8VIG6 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TraipQ8VIG6 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TraipQ8VIG6 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
TraipQ8VIG6 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
TraipQ8VIG6 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TraipQ8VIG6 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
TraipQ8VIG6 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TraipQ8VIG6 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TraipQ8VIG6 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC23.74■■□□□ 1.39
TraipQ8VIG6 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TraipQ8VIG6 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC23.73■■□□□ 1.39
TraipQ8VIG6 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC23.73■■□□□ 1.39
TraipQ8VIG6 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TraipQ8VIG6 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
TraipQ8VIG6 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TraipQ8VIG6 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TraipQ8VIG6 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC23.72■■□□□ 1.39
TraipQ8VIG6 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TraipQ8VIG6 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TraipQ8VIG6 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
TraipQ8VIG6 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TraipQ8VIG6 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
TraipQ8VIG6 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
TraipQ8VIG6 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
TraipQ8VIG6 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TraipQ8VIG6 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TraipQ8VIG6 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TraipQ8VIG6 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.68■■□□□ 1.38
TraipQ8VIG6 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC23.68■■□□□ 1.38
TraipQ8VIG6 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TraipQ8VIG6 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TraipQ8VIG6 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC23.68■■□□□ 1.38
TraipQ8VIG6 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.68■■□□□ 1.38
TraipQ8VIG6 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
TraipQ8VIG6 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TraipQ8VIG6 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC23.67■■□□□ 1.38
TraipQ8VIG6 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TraipQ8VIG6 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
TraipQ8VIG6 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
TraipQ8VIG6 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TraipQ8VIG6 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
TraipQ8VIG6 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TraipQ8VIG6 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
TraipQ8VIG6 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TraipQ8VIG6 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
TraipQ8VIG6 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
TraipQ8VIG6 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TraipQ8VIG6 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC23.64■■□□□ 1.37
TraipQ8VIG6 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TraipQ8VIG6 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TraipQ8VIG6 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TraipQ8VIG6 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
TraipQ8VIG6 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TraipQ8VIG6 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
TraipQ8VIG6 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TraipQ8VIG6 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC23.62■■□□□ 1.37
TraipQ8VIG6 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
TraipQ8VIG6 AC153524.1-201ENSMUST00000220436 1935 ntBASIC23.62■■□□□ 1.37
TraipQ8VIG6 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
TraipQ8VIG6 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TraipQ8VIG6 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TraipQ8VIG6 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TraipQ8VIG6 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
TraipQ8VIG6 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
TraipQ8VIG6 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TraipQ8VIG6 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
TraipQ8VIG6 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
TraipQ8VIG6 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC23.59■■□□□ 1.37
TraipQ8VIG6 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TraipQ8VIG6 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TraipQ8VIG6 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TraipQ8VIG6 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TraipQ8VIG6 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
TraipQ8VIG6 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
TraipQ8VIG6 Gm18755-201ENSMUST00000218030 1099 ntBASIC23.58■■□□□ 1.37
TraipQ8VIG6 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
TraipQ8VIG6 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
TraipQ8VIG6 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC23.57■■□□□ 1.36
TraipQ8VIG6 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC23.57■■□□□ 1.36
TraipQ8VIG6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TraipQ8VIG6 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
TraipQ8VIG6 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TraipQ8VIG6 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TraipQ8VIG6 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC23.56■■□□□ 1.36
TraipQ8VIG6 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
TraipQ8VIG6 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms