Protein–RNA interactions for Protein: Q8VEK3

Hnrnpu, Heterogeneous nuclear ribonucleoprotein U, mousemouse

Known RBP Predictions only

Length 800 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HnrnpuQ8VEK3 Gm5987-201ENSMUST00000196433 1151 ntBASIC27.54■■■□□ 2
HnrnpuQ8VEK3 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
HnrnpuQ8VEK3 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
HnrnpuQ8VEK3 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC27.53■■■□□ 2
HnrnpuQ8VEK3 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC27.53■■■□□ 2
HnrnpuQ8VEK3 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
HnrnpuQ8VEK3 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
HnrnpuQ8VEK3 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC27.52■■■□□ 2
HnrnpuQ8VEK3 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
HnrnpuQ8VEK3 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
HnrnpuQ8VEK3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC27.52■■■□□ 2
HnrnpuQ8VEK3 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
HnrnpuQ8VEK3 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC27.51■■■□□ 2
HnrnpuQ8VEK3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC27.51■■■□□ 2
HnrnpuQ8VEK3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC27.51■■■□□ 2
HnrnpuQ8VEK3 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■■□□ 2
HnrnpuQ8VEK3 H3f3aos-201ENSMUST00000097448 2905 ntBASIC27.51■■■□□ 2
HnrnpuQ8VEK3 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
HnrnpuQ8VEK3 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
HnrnpuQ8VEK3 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
HnrnpuQ8VEK3 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
HnrnpuQ8VEK3 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC27.5■■□□□ 1.99
HnrnpuQ8VEK3 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
HnrnpuQ8VEK3 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC27.49■■□□□ 1.99
HnrnpuQ8VEK3 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC27.49■■□□□ 1.99
HnrnpuQ8VEK3 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
HnrnpuQ8VEK3 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC27.48■■□□□ 1.99
HnrnpuQ8VEK3 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
HnrnpuQ8VEK3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
HnrnpuQ8VEK3 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
HnrnpuQ8VEK3 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC27.47■■□□□ 1.99
HnrnpuQ8VEK3 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC27.47■■□□□ 1.99
HnrnpuQ8VEK3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC27.47■■□□□ 1.99
HnrnpuQ8VEK3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
HnrnpuQ8VEK3 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
HnrnpuQ8VEK3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC27.46■■□□□ 1.99
HnrnpuQ8VEK3 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
HnrnpuQ8VEK3 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
HnrnpuQ8VEK3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
HnrnpuQ8VEK3 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
HnrnpuQ8VEK3 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC27.45■■□□□ 1.98
HnrnpuQ8VEK3 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC27.45■■□□□ 1.98
HnrnpuQ8VEK3 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
HnrnpuQ8VEK3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC27.44■■□□□ 1.98
HnrnpuQ8VEK3 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
HnrnpuQ8VEK3 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC27.43■■□□□ 1.98
HnrnpuQ8VEK3 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC27.43■■□□□ 1.98
HnrnpuQ8VEK3 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
HnrnpuQ8VEK3 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC27.42■■□□□ 1.98
HnrnpuQ8VEK3 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
HnrnpuQ8VEK3 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
HnrnpuQ8VEK3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC27.41■■□□□ 1.98
HnrnpuQ8VEK3 AC117769.4-201ENSMUST00000225679 685 ntBASIC27.41■■□□□ 1.98
HnrnpuQ8VEK3 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
HnrnpuQ8VEK3 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
HnrnpuQ8VEK3 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
HnrnpuQ8VEK3 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
HnrnpuQ8VEK3 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC27.4■■□□□ 1.98
HnrnpuQ8VEK3 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC27.4■■□□□ 1.98
HnrnpuQ8VEK3 AC153524.1-201ENSMUST00000220436 1935 ntBASIC27.39■■□□□ 1.98
HnrnpuQ8VEK3 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
HnrnpuQ8VEK3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
HnrnpuQ8VEK3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC27.39■■□□□ 1.98
HnrnpuQ8VEK3 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
HnrnpuQ8VEK3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
HnrnpuQ8VEK3 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC27.39■■□□□ 1.97
HnrnpuQ8VEK3 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
HnrnpuQ8VEK3 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
HnrnpuQ8VEK3 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
HnrnpuQ8VEK3 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
HnrnpuQ8VEK3 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
HnrnpuQ8VEK3 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
HnrnpuQ8VEK3 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
HnrnpuQ8VEK3 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
HnrnpuQ8VEK3 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
HnrnpuQ8VEK3 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
HnrnpuQ8VEK3 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
HnrnpuQ8VEK3 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
HnrnpuQ8VEK3 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
HnrnpuQ8VEK3 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
HnrnpuQ8VEK3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC27.34■■□□□ 1.97
HnrnpuQ8VEK3 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
HnrnpuQ8VEK3 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
HnrnpuQ8VEK3 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC27.33■■□□□ 1.97
HnrnpuQ8VEK3 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC27.33■■□□□ 1.97
HnrnpuQ8VEK3 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
HnrnpuQ8VEK3 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
HnrnpuQ8VEK3 Gm22567-201ENSMUST00000175542 342 ntBASIC27.32■■□□□ 1.96
HnrnpuQ8VEK3 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
HnrnpuQ8VEK3 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC27.32■■□□□ 1.96
HnrnpuQ8VEK3 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
HnrnpuQ8VEK3 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
HnrnpuQ8VEK3 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
HnrnpuQ8VEK3 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
HnrnpuQ8VEK3 Gm11175-201ENSMUST00000116172 543 ntBASIC27.29■■□□□ 1.96
HnrnpuQ8VEK3 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
HnrnpuQ8VEK3 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
HnrnpuQ8VEK3 AC151971.4-201ENSMUST00000214717 704 ntBASIC27.29■■□□□ 1.96
HnrnpuQ8VEK3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
HnrnpuQ8VEK3 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms