Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retreg1dQ8VE91 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retreg1dQ8VE91 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Retreg1dQ8VE91 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Retreg1dQ8VE91 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retreg1dQ8VE91 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
Retreg1dQ8VE91 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retreg1dQ8VE91 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Retreg1dQ8VE91 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Retreg1dQ8VE91 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retreg1dQ8VE91 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retreg1dQ8VE91 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Retreg1dQ8VE91 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.72■■□□□ 1.07
Retreg1dQ8VE91 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retreg1dQ8VE91 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retreg1dQ8VE91 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.71■■□□□ 1.07
Retreg1dQ8VE91 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Retreg1dQ8VE91 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.71■■□□□ 1.07
Retreg1dQ8VE91 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retreg1dQ8VE91 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Retreg1dQ8VE91 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retreg1dQ8VE91 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retreg1dQ8VE91 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retreg1dQ8VE91 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Retreg1dQ8VE91 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retreg1dQ8VE91 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retreg1dQ8VE91 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retreg1dQ8VE91 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.69■■□□□ 1.06
Retreg1dQ8VE91 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retreg1dQ8VE91 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retreg1dQ8VE91 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retreg1dQ8VE91 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.69■■□□□ 1.06
Retreg1dQ8VE91 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Retreg1dQ8VE91 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Retreg1dQ8VE91 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retreg1dQ8VE91 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Retreg1dQ8VE91 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Retreg1dQ8VE91 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Retreg1dQ8VE91 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retreg1dQ8VE91 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retreg1dQ8VE91 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retreg1dQ8VE91 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Retreg1dQ8VE91 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retreg1dQ8VE91 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.65■■□□□ 1.06
Retreg1dQ8VE91 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retreg1dQ8VE91 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.65■■□□□ 1.06
Retreg1dQ8VE91 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retreg1dQ8VE91 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Retreg1dQ8VE91 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retreg1dQ8VE91 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Retreg1dQ8VE91 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Retreg1dQ8VE91 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Retreg1dQ8VE91 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retreg1dQ8VE91 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Retreg1dQ8VE91 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retreg1dQ8VE91 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retreg1dQ8VE91 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retreg1dQ8VE91 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.63■■□□□ 1.05
Retreg1dQ8VE91 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retreg1dQ8VE91 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retreg1dQ8VE91 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retreg1dQ8VE91 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Retreg1dQ8VE91 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Retreg1dQ8VE91 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Retreg1dQ8VE91 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Retreg1dQ8VE91 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.61■■□□□ 1.05
Retreg1dQ8VE91 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retreg1dQ8VE91 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Retreg1dQ8VE91 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retreg1dQ8VE91 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Retreg1dQ8VE91 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Retreg1dQ8VE91 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Retreg1dQ8VE91 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retreg1dQ8VE91 Gm5921-201ENSMUST00000075898 882 ntBASIC21.6■■□□□ 1.05
Retreg1dQ8VE91 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retreg1dQ8VE91 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retreg1dQ8VE91 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retreg1dQ8VE91 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retreg1dQ8VE91 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Retreg1dQ8VE91 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.59■■□□□ 1.05
Retreg1dQ8VE91 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Retreg1dQ8VE91 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.59■■□□□ 1.05
Retreg1dQ8VE91 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retreg1dQ8VE91 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retreg1dQ8VE91 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Retreg1dQ8VE91 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Retreg1dQ8VE91 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Retreg1dQ8VE91 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.58■■□□□ 1.05
Retreg1dQ8VE91 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Retreg1dQ8VE91 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Retreg1dQ8VE91 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Retreg1dQ8VE91 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Retreg1dQ8VE91 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Retreg1dQ8VE91 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retreg1dQ8VE91 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retreg1dQ8VE91 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
Retreg1dQ8VE91 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retreg1dQ8VE91 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
Retreg1dQ8VE91 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Retreg1dQ8VE91 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms