Protein–RNA interactions for Protein: Q8VCM8

Ncln, Nicalin, mousemouse

Known RBP Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclnQ8VCM8 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NclnQ8VCM8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NclnQ8VCM8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.36■■□□□ 1.01
NclnQ8VCM8 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NclnQ8VCM8 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
NclnQ8VCM8 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
NclnQ8VCM8 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.35■■□□□ 1.01
NclnQ8VCM8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
NclnQ8VCM8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.35■■□□□ 1.01
NclnQ8VCM8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NclnQ8VCM8 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NclnQ8VCM8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
NclnQ8VCM8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.34■■□□□ 1.01
NclnQ8VCM8 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NclnQ8VCM8 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
NclnQ8VCM8 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
NclnQ8VCM8 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
NclnQ8VCM8 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.33■■□□□ 1.01
NclnQ8VCM8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
NclnQ8VCM8 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.33■■□□□ 1
NclnQ8VCM8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NclnQ8VCM8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NclnQ8VCM8 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NclnQ8VCM8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.32■■□□□ 1
NclnQ8VCM8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.32■■□□□ 1
NclnQ8VCM8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
NclnQ8VCM8 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NclnQ8VCM8 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
NclnQ8VCM8 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.31■■□□□ 1
NclnQ8VCM8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
NclnQ8VCM8 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NclnQ8VCM8 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NclnQ8VCM8 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.3■■□□□ 1
NclnQ8VCM8 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NclnQ8VCM8 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
NclnQ8VCM8 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
NclnQ8VCM8 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NclnQ8VCM8 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
NclnQ8VCM8 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.29■■□□□ 1
NclnQ8VCM8 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
NclnQ8VCM8 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.28■■□□□ 1
NclnQ8VCM8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.28■■□□□ 1
NclnQ8VCM8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.28■■□□□ 1
NclnQ8VCM8 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.28■■□□□ 1
NclnQ8VCM8 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NclnQ8VCM8 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
NclnQ8VCM8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.27■■□□□ 1
NclnQ8VCM8 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.27■■□□□ 1
NclnQ8VCM8 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NclnQ8VCM8 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.27■■□□□ 1
NclnQ8VCM8 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NclnQ8VCM8 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
NclnQ8VCM8 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.27■□□□□ 0.99
NclnQ8VCM8 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
NclnQ8VCM8 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NclnQ8VCM8 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.26■□□□□ 0.99
NclnQ8VCM8 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
NclnQ8VCM8 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
NclnQ8VCM8 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NclnQ8VCM8 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.26■□□□□ 0.99
NclnQ8VCM8 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
NclnQ8VCM8 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.25■□□□□ 0.99
NclnQ8VCM8 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.24■□□□□ 0.99
NclnQ8VCM8 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NclnQ8VCM8 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
NclnQ8VCM8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
NclnQ8VCM8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NclnQ8VCM8 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
NclnQ8VCM8 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
NclnQ8VCM8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NclnQ8VCM8 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NclnQ8VCM8 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
NclnQ8VCM8 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NclnQ8VCM8 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NclnQ8VCM8 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
NclnQ8VCM8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NclnQ8VCM8 Gm10420-201ENSMUST00000121713 882 ntBASIC21.22■□□□□ 0.99
NclnQ8VCM8 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NclnQ8VCM8 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
NclnQ8VCM8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.21■□□□□ 0.99
NclnQ8VCM8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.21■□□□□ 0.99
NclnQ8VCM8 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NclnQ8VCM8 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.21■□□□□ 0.99
NclnQ8VCM8 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NclnQ8VCM8 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.2■□□□□ 0.98
NclnQ8VCM8 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.2■□□□□ 0.98
NclnQ8VCM8 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NclnQ8VCM8 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
NclnQ8VCM8 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NclnQ8VCM8 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NclnQ8VCM8 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.19■□□□□ 0.98
NclnQ8VCM8 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
NclnQ8VCM8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
NclnQ8VCM8 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.19■□□□□ 0.98
NclnQ8VCM8 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
NclnQ8VCM8 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NclnQ8VCM8 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NclnQ8VCM8 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NclnQ8VCM8 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NclnQ8VCM8 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms