Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Terc-201ENSMUST00000082862 423 ntBASIC21.23■□□□□ 0.99
Lsm1Q8VC85 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lsm1Q8VC85 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lsm1Q8VC85 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lsm1Q8VC85 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.22■□□□□ 0.99
Lsm1Q8VC85 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lsm1Q8VC85 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Lsm1Q8VC85 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Lsm1Q8VC85 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Lsm1Q8VC85 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lsm1Q8VC85 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Lsm1Q8VC85 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Lsm1Q8VC85 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lsm1Q8VC85 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lsm1Q8VC85 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Lsm1Q8VC85 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lsm1Q8VC85 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lsm1Q8VC85 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lsm1Q8VC85 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lsm1Q8VC85 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lsm1Q8VC85 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.19■□□□□ 0.98
Lsm1Q8VC85 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
Lsm1Q8VC85 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Lsm1Q8VC85 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lsm1Q8VC85 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lsm1Q8VC85 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.17■□□□□ 0.98
Lsm1Q8VC85 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Lsm1Q8VC85 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Lsm1Q8VC85 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lsm1Q8VC85 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.16■□□□□ 0.98
Lsm1Q8VC85 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lsm1Q8VC85 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.16■□□□□ 0.98
Lsm1Q8VC85 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lsm1Q8VC85 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Lsm1Q8VC85 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Lsm1Q8VC85 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lsm1Q8VC85 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lsm1Q8VC85 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Lsm1Q8VC85 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lsm1Q8VC85 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lsm1Q8VC85 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lsm1Q8VC85 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Lsm1Q8VC85 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Lsm1Q8VC85 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Lsm1Q8VC85 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Lsm1Q8VC85 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.14■□□□□ 0.97
Lsm1Q8VC85 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lsm1Q8VC85 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.14■□□□□ 0.97
Lsm1Q8VC85 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Lsm1Q8VC85 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lsm1Q8VC85 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.14■□□□□ 0.97
Lsm1Q8VC85 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.14■□□□□ 0.97
Lsm1Q8VC85 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lsm1Q8VC85 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Lsm1Q8VC85 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lsm1Q8VC85 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lsm1Q8VC85 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Lsm1Q8VC85 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Lsm1Q8VC85 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.11■□□□□ 0.97
Lsm1Q8VC85 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lsm1Q8VC85 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Lsm1Q8VC85 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lsm1Q8VC85 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lsm1Q8VC85 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lsm1Q8VC85 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.1■□□□□ 0.97
Lsm1Q8VC85 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Lsm1Q8VC85 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Lsm1Q8VC85 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.1■□□□□ 0.97
Lsm1Q8VC85 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lsm1Q8VC85 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Lsm1Q8VC85 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lsm1Q8VC85 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Lsm1Q8VC85 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Lsm1Q8VC85 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.08■□□□□ 0.97
Lsm1Q8VC85 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Lsm1Q8VC85 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Lsm1Q8VC85 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Lsm1Q8VC85 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.96
Lsm1Q8VC85 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lsm1Q8VC85 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lsm1Q8VC85 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Lsm1Q8VC85 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lsm1Q8VC85 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lsm1Q8VC85 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lsm1Q8VC85 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lsm1Q8VC85 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Lsm1Q8VC85 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.06■□□□□ 0.96
Lsm1Q8VC85 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.06■□□□□ 0.96
Lsm1Q8VC85 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Lsm1Q8VC85 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Lsm1Q8VC85 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.06■□□□□ 0.96
Lsm1Q8VC85 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Lsm1Q8VC85 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.06■□□□□ 0.96
Lsm1Q8VC85 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Lsm1Q8VC85 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lsm1Q8VC85 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lsm1Q8VC85 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Lsm1Q8VC85 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lsm1Q8VC85 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lsm1Q8VC85 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms