Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Atf7Q8R0S1 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Atf7Q8R0S1 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
Atf7Q8R0S1 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Atf7Q8R0S1 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
Atf7Q8R0S1 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Atf7Q8R0S1 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
Atf7Q8R0S1 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Atf7Q8R0S1 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Atf7Q8R0S1 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
Atf7Q8R0S1 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Atf7Q8R0S1 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Atf7Q8R0S1 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
Atf7Q8R0S1 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC26.15■■□□□ 1.78
Atf7Q8R0S1 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
Atf7Q8R0S1 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Atf7Q8R0S1 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Atf7Q8R0S1 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Atf7Q8R0S1 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Atf7Q8R0S1 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
Atf7Q8R0S1 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Atf7Q8R0S1 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Atf7Q8R0S1 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Atf7Q8R0S1 AC153524.1-201ENSMUST00000220436 1935 ntBASIC26.12■■□□□ 1.77
Atf7Q8R0S1 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
Atf7Q8R0S1 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
Atf7Q8R0S1 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
Atf7Q8R0S1 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC26.11■■□□□ 1.77
Atf7Q8R0S1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC26.11■■□□□ 1.77
Atf7Q8R0S1 AC151971.4-201ENSMUST00000214717 704 ntBASIC26.11■■□□□ 1.77
Atf7Q8R0S1 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Atf7Q8R0S1 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
Atf7Q8R0S1 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Atf7Q8R0S1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC26.1■■□□□ 1.77
Atf7Q8R0S1 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Atf7Q8R0S1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
Atf7Q8R0S1 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Atf7Q8R0S1 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Atf7Q8R0S1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC26.09■■□□□ 1.77
Atf7Q8R0S1 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Atf7Q8R0S1 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Atf7Q8R0S1 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Atf7Q8R0S1 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Atf7Q8R0S1 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Atf7Q8R0S1 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Atf7Q8R0S1 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
Atf7Q8R0S1 Gm11175-201ENSMUST00000116172 543 ntBASIC26.06■■□□□ 1.76
Atf7Q8R0S1 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC26.06■■□□□ 1.76
Atf7Q8R0S1 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Atf7Q8R0S1 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Atf7Q8R0S1 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
Atf7Q8R0S1 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
Atf7Q8R0S1 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Atf7Q8R0S1 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Atf7Q8R0S1 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
Atf7Q8R0S1 AC117769.4-201ENSMUST00000225679 685 ntBASIC26.04■■□□□ 1.76
Atf7Q8R0S1 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Atf7Q8R0S1 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Atf7Q8R0S1 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC26.04■■□□□ 1.76
Atf7Q8R0S1 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Atf7Q8R0S1 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Atf7Q8R0S1 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
Atf7Q8R0S1 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Atf7Q8R0S1 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Atf7Q8R0S1 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
Atf7Q8R0S1 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC26.02■■□□□ 1.76
Atf7Q8R0S1 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
Atf7Q8R0S1 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
Atf7Q8R0S1 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
Atf7Q8R0S1 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
Atf7Q8R0S1 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Atf7Q8R0S1 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Atf7Q8R0S1 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Atf7Q8R0S1 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
Atf7Q8R0S1 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Atf7Q8R0S1 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
Atf7Q8R0S1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Atf7Q8R0S1 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Atf7Q8R0S1 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC26■■□□□ 1.75
Atf7Q8R0S1 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
Atf7Q8R0S1 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
Atf7Q8R0S1 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC26■■□□□ 1.75
Atf7Q8R0S1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC26■■□□□ 1.75
Atf7Q8R0S1 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
Atf7Q8R0S1 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC25.99■■□□□ 1.75
Atf7Q8R0S1 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
Atf7Q8R0S1 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Atf7Q8R0S1 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Atf7Q8R0S1 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Atf7Q8R0S1 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Atf7Q8R0S1 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Atf7Q8R0S1 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Atf7Q8R0S1 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Atf7Q8R0S1 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
Atf7Q8R0S1 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Atf7Q8R0S1 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Atf7Q8R0S1 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Atf7Q8R0S1 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Atf7Q8R0S1 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
Atf7Q8R0S1 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms