Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Alms1Q8K4E0 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Alms1Q8K4E0 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.93■■□□□ 1.1
Alms1Q8K4E0 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Alms1Q8K4E0 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Alms1Q8K4E0 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
Alms1Q8K4E0 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Alms1Q8K4E0 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Alms1Q8K4E0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Alms1Q8K4E0 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Alms1Q8K4E0 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.91■■□□□ 1.1
Alms1Q8K4E0 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Alms1Q8K4E0 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Alms1Q8K4E0 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Alms1Q8K4E0 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Alms1Q8K4E0 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Alms1Q8K4E0 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Alms1Q8K4E0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Alms1Q8K4E0 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Alms1Q8K4E0 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Alms1Q8K4E0 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Alms1Q8K4E0 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Alms1Q8K4E0 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.87■■□□□ 1.09
Alms1Q8K4E0 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Alms1Q8K4E0 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Alms1Q8K4E0 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Alms1Q8K4E0 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Alms1Q8K4E0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Alms1Q8K4E0 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Alms1Q8K4E0 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Alms1Q8K4E0 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Alms1Q8K4E0 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.86■■□□□ 1.09
Alms1Q8K4E0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Alms1Q8K4E0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Alms1Q8K4E0 Etf1-202ENSMUST00000180351 108 ntBASIC21.84■■□□□ 1.09
Alms1Q8K4E0 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Alms1Q8K4E0 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Alms1Q8K4E0 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Alms1Q8K4E0 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Alms1Q8K4E0 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Alms1Q8K4E0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Alms1Q8K4E0 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.83■■□□□ 1.09
Alms1Q8K4E0 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Alms1Q8K4E0 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Alms1Q8K4E0 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Alms1Q8K4E0 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.82■■□□□ 1.08
Alms1Q8K4E0 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Alms1Q8K4E0 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Alms1Q8K4E0 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Alms1Q8K4E0 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Alms1Q8K4E0 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Alms1Q8K4E0 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Alms1Q8K4E0 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Alms1Q8K4E0 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.81■■□□□ 1.08
Alms1Q8K4E0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Alms1Q8K4E0 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.8■■□□□ 1.08
Alms1Q8K4E0 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.8■■□□□ 1.08
Alms1Q8K4E0 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.79■■□□□ 1.08
Alms1Q8K4E0 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Alms1Q8K4E0 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Alms1Q8K4E0 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.79■■□□□ 1.08
Alms1Q8K4E0 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.79■■□□□ 1.08
Alms1Q8K4E0 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Alms1Q8K4E0 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Alms1Q8K4E0 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.79■■□□□ 1.08
Alms1Q8K4E0 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Alms1Q8K4E0 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Alms1Q8K4E0 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Alms1Q8K4E0 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Alms1Q8K4E0 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Alms1Q8K4E0 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Alms1Q8K4E0 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Alms1Q8K4E0 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Alms1Q8K4E0 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.77■■□□□ 1.08
Alms1Q8K4E0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Alms1Q8K4E0 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Alms1Q8K4E0 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.77■■□□□ 1.08
Alms1Q8K4E0 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Alms1Q8K4E0 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Alms1Q8K4E0 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Alms1Q8K4E0 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Alms1Q8K4E0 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Alms1Q8K4E0 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.75■■□□□ 1.07
Alms1Q8K4E0 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Alms1Q8K4E0 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Alms1Q8K4E0 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Alms1Q8K4E0 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Alms1Q8K4E0 Gm21956-201ENSMUST00000179946 522 ntBASIC21.75■■□□□ 1.07
Alms1Q8K4E0 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Alms1Q8K4E0 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Alms1Q8K4E0 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.75■■□□□ 1.07
Alms1Q8K4E0 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Alms1Q8K4E0 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Alms1Q8K4E0 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Alms1Q8K4E0 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Alms1Q8K4E0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.74■■□□□ 1.07
Alms1Q8K4E0 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Alms1Q8K4E0 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Alms1Q8K4E0 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Alms1Q8K4E0 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms