Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.08■□□□□ 0.97
Hmgcs1Q8JZK9 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Hmgcs1Q8JZK9 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.97
Hmgcs1Q8JZK9 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
Hmgcs1Q8JZK9 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Hmgcs1Q8JZK9 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Hmgcs1Q8JZK9 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hmgcs1Q8JZK9 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hmgcs1Q8JZK9 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hmgcs1Q8JZK9 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hmgcs1Q8JZK9 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hmgcs1Q8JZK9 Terc-201ENSMUST00000082862 423 ntBASIC21.06■□□□□ 0.96
Hmgcs1Q8JZK9 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hmgcs1Q8JZK9 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hmgcs1Q8JZK9 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hmgcs1Q8JZK9 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hmgcs1Q8JZK9 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Hmgcs1Q8JZK9 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Hmgcs1Q8JZK9 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.05■□□□□ 0.96
Hmgcs1Q8JZK9 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hmgcs1Q8JZK9 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.04■□□□□ 0.96
Hmgcs1Q8JZK9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.04■□□□□ 0.96
Hmgcs1Q8JZK9 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmgcs1Q8JZK9 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmgcs1Q8JZK9 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hmgcs1Q8JZK9 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hmgcs1Q8JZK9 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hmgcs1Q8JZK9 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hmgcs1Q8JZK9 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.02■□□□□ 0.96
Hmgcs1Q8JZK9 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hmgcs1Q8JZK9 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Hmgcs1Q8JZK9 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.02■□□□□ 0.96
Hmgcs1Q8JZK9 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.01■□□□□ 0.95
Hmgcs1Q8JZK9 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hmgcs1Q8JZK9 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hmgcs1Q8JZK9 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Hmgcs1Q8JZK9 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Hmgcs1Q8JZK9 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.01■□□□□ 0.95
Hmgcs1Q8JZK9 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Hmgcs1Q8JZK9 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hmgcs1Q8JZK9 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hmgcs1Q8JZK9 Pkd1-207ENSMUST00000228550 1050 ntBASIC21■□□□□ 0.95
Hmgcs1Q8JZK9 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hmgcs1Q8JZK9 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hmgcs1Q8JZK9 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21■□□□□ 0.95
Hmgcs1Q8JZK9 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21■□□□□ 0.95
Hmgcs1Q8JZK9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hmgcs1Q8JZK9 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.99■□□□□ 0.95
Hmgcs1Q8JZK9 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.99■□□□□ 0.95
Hmgcs1Q8JZK9 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hmgcs1Q8JZK9 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.98■□□□□ 0.95
Hmgcs1Q8JZK9 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hmgcs1Q8JZK9 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Hmgcs1Q8JZK9 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Hmgcs1Q8JZK9 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hmgcs1Q8JZK9 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hmgcs1Q8JZK9 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Hmgcs1Q8JZK9 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Hmgcs1Q8JZK9 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Hmgcs1Q8JZK9 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgcs1Q8JZK9 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Hmgcs1Q8JZK9 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgcs1Q8JZK9 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgcs1Q8JZK9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgcs1Q8JZK9 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Hmgcs1Q8JZK9 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
Hmgcs1Q8JZK9 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgcs1Q8JZK9 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hmgcs1Q8JZK9 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Hmgcs1Q8JZK9 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hmgcs1Q8JZK9 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hmgcs1Q8JZK9 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hmgcs1Q8JZK9 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Hmgcs1Q8JZK9 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hmgcs1Q8JZK9 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.94■□□□□ 0.94
Hmgcs1Q8JZK9 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hmgcs1Q8JZK9 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hmgcs1Q8JZK9 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.93■□□□□ 0.94
Hmgcs1Q8JZK9 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgcs1Q8JZK9 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgcs1Q8JZK9 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgcs1Q8JZK9 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
Hmgcs1Q8JZK9 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgcs1Q8JZK9 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.93■□□□□ 0.94
Hmgcs1Q8JZK9 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgcs1Q8JZK9 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hmgcs1Q8JZK9 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.93■□□□□ 0.94
Hmgcs1Q8JZK9 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hmgcs1Q8JZK9 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hmgcs1Q8JZK9 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Hmgcs1Q8JZK9 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Hmgcs1Q8JZK9 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.91■□□□□ 0.94
Hmgcs1Q8JZK9 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Hmgcs1Q8JZK9 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hmgcs1Q8JZK9 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Hmgcs1Q8JZK9 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.9■□□□□ 0.94
Hmgcs1Q8JZK9 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.9■□□□□ 0.94
Hmgcs1Q8JZK9 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.9■□□□□ 0.94
Hmgcs1Q8JZK9 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hmgcs1Q8JZK9 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms