Protein–RNA interactions for Protein: Q8CEZ1

Smco1, Single-pass membrane and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco1Q8CEZ1 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smco1Q8CEZ1 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smco1Q8CEZ1 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Smco1Q8CEZ1 Gm24804-201ENSMUST00000174982 85 ntBASIC20.22■□□□□ 0.83
Smco1Q8CEZ1 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Smco1Q8CEZ1 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smco1Q8CEZ1 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Smco1Q8CEZ1 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smco1Q8CEZ1 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.21■□□□□ 0.83
Smco1Q8CEZ1 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smco1Q8CEZ1 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.21■□□□□ 0.83
Smco1Q8CEZ1 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Smco1Q8CEZ1 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
Smco1Q8CEZ1 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Smco1Q8CEZ1 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smco1Q8CEZ1 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smco1Q8CEZ1 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Smco1Q8CEZ1 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smco1Q8CEZ1 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smco1Q8CEZ1 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Smco1Q8CEZ1 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Smco1Q8CEZ1 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smco1Q8CEZ1 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Smco1Q8CEZ1 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smco1Q8CEZ1 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smco1Q8CEZ1 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smco1Q8CEZ1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Smco1Q8CEZ1 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Smco1Q8CEZ1 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smco1Q8CEZ1 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Smco1Q8CEZ1 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smco1Q8CEZ1 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smco1Q8CEZ1 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smco1Q8CEZ1 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smco1Q8CEZ1 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
Smco1Q8CEZ1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smco1Q8CEZ1 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smco1Q8CEZ1 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smco1Q8CEZ1 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Smco1Q8CEZ1 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Smco1Q8CEZ1 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smco1Q8CEZ1 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smco1Q8CEZ1 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.16■□□□□ 0.82
Smco1Q8CEZ1 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smco1Q8CEZ1 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smco1Q8CEZ1 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smco1Q8CEZ1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Smco1Q8CEZ1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Smco1Q8CEZ1 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smco1Q8CEZ1 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smco1Q8CEZ1 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smco1Q8CEZ1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Smco1Q8CEZ1 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.13■□□□□ 0.81
Smco1Q8CEZ1 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.13■□□□□ 0.81
Smco1Q8CEZ1 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smco1Q8CEZ1 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smco1Q8CEZ1 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
Smco1Q8CEZ1 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Smco1Q8CEZ1 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.12■□□□□ 0.81
Smco1Q8CEZ1 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Smco1Q8CEZ1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smco1Q8CEZ1 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smco1Q8CEZ1 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Smco1Q8CEZ1 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.11■□□□□ 0.81
Smco1Q8CEZ1 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.11■□□□□ 0.81
Smco1Q8CEZ1 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Smco1Q8CEZ1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smco1Q8CEZ1 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
Smco1Q8CEZ1 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smco1Q8CEZ1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Smco1Q8CEZ1 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smco1Q8CEZ1 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smco1Q8CEZ1 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.1■□□□□ 0.81
Smco1Q8CEZ1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smco1Q8CEZ1 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Smco1Q8CEZ1 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smco1Q8CEZ1 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.1■□□□□ 0.81
Smco1Q8CEZ1 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smco1Q8CEZ1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Smco1Q8CEZ1 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
Smco1Q8CEZ1 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smco1Q8CEZ1 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Smco1Q8CEZ1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Smco1Q8CEZ1 Notumos-201ENSMUST00000151998 2659 ntBASIC20.08■□□□□ 0.81
Smco1Q8CEZ1 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.08■□□□□ 0.81
Smco1Q8CEZ1 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smco1Q8CEZ1 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.08■□□□□ 0.81
Smco1Q8CEZ1 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Smco1Q8CEZ1 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
Smco1Q8CEZ1 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smco1Q8CEZ1 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Smco1Q8CEZ1 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smco1Q8CEZ1 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smco1Q8CEZ1 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smco1Q8CEZ1 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smco1Q8CEZ1 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smco1Q8CEZ1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
Smco1Q8CEZ1 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Smco1Q8CEZ1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smco1Q8CEZ1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms