Protein–RNA interactions for Protein: Q8CE47

Slc49a3, Solute carrier family 49 member A3, mousemouse

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc49a3Q8CE47 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc49a3Q8CE47 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc49a3Q8CE47 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.3■□□□□ 0.84
Slc49a3Q8CE47 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc49a3Q8CE47 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Slc49a3Q8CE47 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Slc49a3Q8CE47 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc49a3Q8CE47 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc49a3Q8CE47 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc49a3Q8CE47 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc49a3Q8CE47 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc49a3Q8CE47 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc49a3Q8CE47 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Slc49a3Q8CE47 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.27■□□□□ 0.84
Slc49a3Q8CE47 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Slc49a3Q8CE47 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Slc49a3Q8CE47 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Slc49a3Q8CE47 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Slc49a3Q8CE47 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc49a3Q8CE47 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Slc49a3Q8CE47 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.26■□□□□ 0.83
Slc49a3Q8CE47 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.26■□□□□ 0.83
Slc49a3Q8CE47 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Slc49a3Q8CE47 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc49a3Q8CE47 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc49a3Q8CE47 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Slc49a3Q8CE47 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Slc49a3Q8CE47 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Slc49a3Q8CE47 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Slc49a3Q8CE47 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Slc49a3Q8CE47 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc49a3Q8CE47 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc49a3Q8CE47 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Slc49a3Q8CE47 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc49a3Q8CE47 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc49a3Q8CE47 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Slc49a3Q8CE47 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc49a3Q8CE47 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Slc49a3Q8CE47 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
Slc49a3Q8CE47 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc49a3Q8CE47 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Slc49a3Q8CE47 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc49a3Q8CE47 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.23■□□□□ 0.83
Slc49a3Q8CE47 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Slc49a3Q8CE47 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc49a3Q8CE47 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc49a3Q8CE47 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc49a3Q8CE47 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc49a3Q8CE47 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc49a3Q8CE47 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc49a3Q8CE47 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc49a3Q8CE47 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc49a3Q8CE47 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc49a3Q8CE47 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Slc49a3Q8CE47 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc49a3Q8CE47 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.21■□□□□ 0.83
Slc49a3Q8CE47 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Slc49a3Q8CE47 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc49a3Q8CE47 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc49a3Q8CE47 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.2■□□□□ 0.82
Slc49a3Q8CE47 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc49a3Q8CE47 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Slc49a3Q8CE47 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slc49a3Q8CE47 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slc49a3Q8CE47 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slc49a3Q8CE47 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slc49a3Q8CE47 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc49a3Q8CE47 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.18■□□□□ 0.82
Slc49a3Q8CE47 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc49a3Q8CE47 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc49a3Q8CE47 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Slc49a3Q8CE47 Gm37136-201ENSMUST00000194368 194 ntBASIC20.18■□□□□ 0.82
Slc49a3Q8CE47 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc49a3Q8CE47 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Slc49a3Q8CE47 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.18■□□□□ 0.82
Slc49a3Q8CE47 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc49a3Q8CE47 Notumos-201ENSMUST00000151998 2659 ntBASIC20.18■□□□□ 0.82
Slc49a3Q8CE47 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc49a3Q8CE47 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc49a3Q8CE47 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Slc49a3Q8CE47 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
Slc49a3Q8CE47 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc49a3Q8CE47 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Slc49a3Q8CE47 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc49a3Q8CE47 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc49a3Q8CE47 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.16■□□□□ 0.82
Slc49a3Q8CE47 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc49a3Q8CE47 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc49a3Q8CE47 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.14■□□□□ 0.81
Slc49a3Q8CE47 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc49a3Q8CE47 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc49a3Q8CE47 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc49a3Q8CE47 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc49a3Q8CE47 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Slc49a3Q8CE47 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc49a3Q8CE47 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Slc49a3Q8CE47 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Slc49a3Q8CE47 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc49a3Q8CE47 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Slc49a3Q8CE47 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms