Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ska3Q8C263 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ska3Q8C263 Gm27502-201ENSMUST00000183495 199 ntBASIC20.74■□□□□ 0.91
Ska3Q8C263 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ska3Q8C263 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ska3Q8C263 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ska3Q8C263 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ska3Q8C263 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ska3Q8C263 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.73■□□□□ 0.91
Ska3Q8C263 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ska3Q8C263 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.73■□□□□ 0.91
Ska3Q8C263 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Ska3Q8C263 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ska3Q8C263 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ska3Q8C263 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ska3Q8C263 Gm14523-201ENSMUST00000117260 558 ntBASIC20.72■□□□□ 0.91
Ska3Q8C263 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.72■□□□□ 0.91
Ska3Q8C263 Gm12366-201ENSMUST00000121722 873 ntBASIC20.72■□□□□ 0.91
Ska3Q8C263 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.72■□□□□ 0.91
Ska3Q8C263 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.72■□□□□ 0.91
Ska3Q8C263 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.72■□□□□ 0.91
Ska3Q8C263 Gm5786-201ENSMUST00000085368 882 ntBASIC20.72■□□□□ 0.91
Ska3Q8C263 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Ska3Q8C263 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ska3Q8C263 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.71■□□□□ 0.91
Ska3Q8C263 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ska3Q8C263 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.71■□□□□ 0.91
Ska3Q8C263 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Ska3Q8C263 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ska3Q8C263 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ska3Q8C263 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ska3Q8C263 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.7■□□□□ 0.9
Ska3Q8C263 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ska3Q8C263 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Ska3Q8C263 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
Ska3Q8C263 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ska3Q8C263 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ska3Q8C263 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ska3Q8C263 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ska3Q8C263 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Ska3Q8C263 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ska3Q8C263 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Ska3Q8C263 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ska3Q8C263 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ska3Q8C263 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ska3Q8C263 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ska3Q8C263 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ska3Q8C263 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ska3Q8C263 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Ska3Q8C263 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ska3Q8C263 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ska3Q8C263 Gm7332-201ENSMUST00000118351 454 ntBASIC20.67■□□□□ 0.9
Ska3Q8C263 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.67■□□□□ 0.9
Ska3Q8C263 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ska3Q8C263 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Ska3Q8C263 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ska3Q8C263 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.66■□□□□ 0.9
Ska3Q8C263 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ska3Q8C263 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ska3Q8C263 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.65■□□□□ 0.9
Ska3Q8C263 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ska3Q8C263 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ska3Q8C263 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ska3Q8C263 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ska3Q8C263 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Ska3Q8C263 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ska3Q8C263 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ska3Q8C263 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ska3Q8C263 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ska3Q8C263 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ska3Q8C263 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ska3Q8C263 Cap2-205ENSMUST00000225824 1634 ntBASIC20.64■□□□□ 0.89
Ska3Q8C263 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
Ska3Q8C263 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.63■□□□□ 0.89
Ska3Q8C263 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ska3Q8C263 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ska3Q8C263 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.63■□□□□ 0.89
Ska3Q8C263 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ska3Q8C263 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ska3Q8C263 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ska3Q8C263 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
Ska3Q8C263 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ska3Q8C263 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.62■□□□□ 0.89
Ska3Q8C263 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ska3Q8C263 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Ska3Q8C263 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ska3Q8C263 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ska3Q8C263 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ska3Q8C263 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.61■□□□□ 0.89
Ska3Q8C263 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Ska3Q8C263 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ska3Q8C263 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ska3Q8C263 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ska3Q8C263 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ska3Q8C263 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.6■□□□□ 0.89
Ska3Q8C263 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ska3Q8C263 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ska3Q8C263 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ska3Q8C263 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ska3Q8C263 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms