Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cpne1Q8C166 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.6■□□□□ 0.89
Cpne1Q8C166 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cpne1Q8C166 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cpne1Q8C166 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cpne1Q8C166 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cpne1Q8C166 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cpne1Q8C166 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cpne1Q8C166 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cpne1Q8C166 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Cpne1Q8C166 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.58■□□□□ 0.89
Cpne1Q8C166 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cpne1Q8C166 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cpne1Q8C166 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cpne1Q8C166 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Cpne1Q8C166 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
Cpne1Q8C166 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cpne1Q8C166 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cpne1Q8C166 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cpne1Q8C166 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.57■□□□□ 0.88
Cpne1Q8C166 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.57■□□□□ 0.88
Cpne1Q8C166 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cpne1Q8C166 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Cpne1Q8C166 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cpne1Q8C166 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Cpne1Q8C166 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cpne1Q8C166 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cpne1Q8C166 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.56■□□□□ 0.88
Cpne1Q8C166 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cpne1Q8C166 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cpne1Q8C166 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cpne1Q8C166 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cpne1Q8C166 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.56■□□□□ 0.88
Cpne1Q8C166 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.56■□□□□ 0.88
Cpne1Q8C166 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cpne1Q8C166 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cpne1Q8C166 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cpne1Q8C166 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cpne1Q8C166 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cpne1Q8C166 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cpne1Q8C166 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.55■□□□□ 0.88
Cpne1Q8C166 Gm12366-201ENSMUST00000121722 873 ntBASIC20.55■□□□□ 0.88
Cpne1Q8C166 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.55■□□□□ 0.88
Cpne1Q8C166 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.55■□□□□ 0.88
Cpne1Q8C166 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cpne1Q8C166 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.55■□□□□ 0.88
Cpne1Q8C166 Gm5786-201ENSMUST00000085368 882 ntBASIC20.55■□□□□ 0.88
Cpne1Q8C166 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cpne1Q8C166 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.54■□□□□ 0.88
Cpne1Q8C166 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cpne1Q8C166 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cpne1Q8C166 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.54■□□□□ 0.88
Cpne1Q8C166 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Cpne1Q8C166 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpne1Q8C166 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpne1Q8C166 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Cpne1Q8C166 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpne1Q8C166 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Cpne1Q8C166 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cpne1Q8C166 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cpne1Q8C166 Gm14523-201ENSMUST00000117260 558 ntBASIC20.52■□□□□ 0.88
Cpne1Q8C166 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cpne1Q8C166 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Cpne1Q8C166 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Cpne1Q8C166 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cpne1Q8C166 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cpne1Q8C166 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cpne1Q8C166 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cpne1Q8C166 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cpne1Q8C166 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cpne1Q8C166 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Cpne1Q8C166 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Cpne1Q8C166 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
Cpne1Q8C166 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cpne1Q8C166 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Cpne1Q8C166 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Cpne1Q8C166 Cap2-205ENSMUST00000225824 1634 ntBASIC20.49■□□□□ 0.87
Cpne1Q8C166 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cpne1Q8C166 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cpne1Q8C166 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.49■□□□□ 0.87
Cpne1Q8C166 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.49■□□□□ 0.87
Cpne1Q8C166 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.49■□□□□ 0.87
Cpne1Q8C166 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.49■□□□□ 0.87
Cpne1Q8C166 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cpne1Q8C166 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cpne1Q8C166 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
Cpne1Q8C166 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Cpne1Q8C166 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Cpne1Q8C166 Gm7332-201ENSMUST00000118351 454 ntBASIC20.48■□□□□ 0.87
Cpne1Q8C166 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.48■□□□□ 0.87
Cpne1Q8C166 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cpne1Q8C166 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cpne1Q8C166 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cpne1Q8C166 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cpne1Q8C166 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cpne1Q8C166 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cpne1Q8C166 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Cpne1Q8C166 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cpne1Q8C166 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cpne1Q8C166 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms