Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC22.39■■□□□ 1.17
Sfr1Q8BP27 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Sfr1Q8BP27 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Sfr1Q8BP27 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Sfr1Q8BP27 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Sfr1Q8BP27 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sfr1Q8BP27 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sfr1Q8BP27 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Sfr1Q8BP27 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Sfr1Q8BP27 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC22.38■■□□□ 1.17
Sfr1Q8BP27 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Sfr1Q8BP27 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Sfr1Q8BP27 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.37■■□□□ 1.17
Sfr1Q8BP27 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Sfr1Q8BP27 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.37■■□□□ 1.17
Sfr1Q8BP27 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Sfr1Q8BP27 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Sfr1Q8BP27 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Sfr1Q8BP27 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Sfr1Q8BP27 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Sfr1Q8BP27 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Sfr1Q8BP27 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Sfr1Q8BP27 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sfr1Q8BP27 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.35■■□□□ 1.17
Sfr1Q8BP27 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sfr1Q8BP27 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Sfr1Q8BP27 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.35■■□□□ 1.17
Sfr1Q8BP27 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.35■■□□□ 1.17
Sfr1Q8BP27 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Sfr1Q8BP27 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC22.35■■□□□ 1.17
Sfr1Q8BP27 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Sfr1Q8BP27 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Sfr1Q8BP27 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sfr1Q8BP27 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Sfr1Q8BP27 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Sfr1Q8BP27 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.32■■□□□ 1.16
Sfr1Q8BP27 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sfr1Q8BP27 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sfr1Q8BP27 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Sfr1Q8BP27 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sfr1Q8BP27 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Sfr1Q8BP27 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Sfr1Q8BP27 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sfr1Q8BP27 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sfr1Q8BP27 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Sfr1Q8BP27 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Sfr1Q8BP27 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Sfr1Q8BP27 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Sfr1Q8BP27 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC22.3■■□□□ 1.16
Sfr1Q8BP27 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
Sfr1Q8BP27 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Sfr1Q8BP27 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Sfr1Q8BP27 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Sfr1Q8BP27 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Sfr1Q8BP27 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sfr1Q8BP27 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Sfr1Q8BP27 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sfr1Q8BP27 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC22.28■■□□□ 1.16
Sfr1Q8BP27 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Sfr1Q8BP27 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sfr1Q8BP27 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Sfr1Q8BP27 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sfr1Q8BP27 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sfr1Q8BP27 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sfr1Q8BP27 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Sfr1Q8BP27 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sfr1Q8BP27 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sfr1Q8BP27 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sfr1Q8BP27 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sfr1Q8BP27 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Sfr1Q8BP27 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Sfr1Q8BP27 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Sfr1Q8BP27 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sfr1Q8BP27 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Sfr1Q8BP27 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Sfr1Q8BP27 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC22.24■■□□□ 1.15
Sfr1Q8BP27 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Sfr1Q8BP27 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Sfr1Q8BP27 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Sfr1Q8BP27 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Sfr1Q8BP27 Gm10420-201ENSMUST00000121713 882 ntBASIC22.22■■□□□ 1.15
Sfr1Q8BP27 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Sfr1Q8BP27 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Sfr1Q8BP27 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Sfr1Q8BP27 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Sfr1Q8BP27 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sfr1Q8BP27 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sfr1Q8BP27 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Sfr1Q8BP27 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Sfr1Q8BP27 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Sfr1Q8BP27 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC22.2■■□□□ 1.14
Sfr1Q8BP27 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Sfr1Q8BP27 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Sfr1Q8BP27 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC22.2■■□□□ 1.14
Sfr1Q8BP27 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Sfr1Q8BP27 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC22.2■■□□□ 1.14
Sfr1Q8BP27 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Sfr1Q8BP27 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC22.19■■□□□ 1.14
Sfr1Q8BP27 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC22.19■■□□□ 1.14
Sfr1Q8BP27 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms