Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC30■■■□□ 2.39
Col16a1Q8BLX7 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC30■■■□□ 2.39
Col16a1Q8BLX7 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC30■■■□□ 2.39
Col16a1Q8BLX7 AC122428.3-201ENSMUST00000215551 2290 ntBASIC29.99■■■□□ 2.39
Col16a1Q8BLX7 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC29.99■■■□□ 2.39
Col16a1Q8BLX7 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC29.99■■■□□ 2.39
Col16a1Q8BLX7 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC29.99■■■□□ 2.39
Col16a1Q8BLX7 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC29.98■■■□□ 2.39
Col16a1Q8BLX7 Gm7199-201ENSMUST00000118327 1485 ntBASIC29.98■■■□□ 2.39
Col16a1Q8BLX7 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC29.98■■■□□ 2.39
Col16a1Q8BLX7 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC29.98■■■□□ 2.39
Col16a1Q8BLX7 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC29.98■■■□□ 2.39
Col16a1Q8BLX7 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Col16a1Q8BLX7 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC29.97■■■□□ 2.39
Col16a1Q8BLX7 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC29.97■■■□□ 2.39
Col16a1Q8BLX7 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Col16a1Q8BLX7 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Col16a1Q8BLX7 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Col16a1Q8BLX7 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Col16a1Q8BLX7 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Col16a1Q8BLX7 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC29.96■■■□□ 2.39
Col16a1Q8BLX7 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
Col16a1Q8BLX7 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Col16a1Q8BLX7 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Col16a1Q8BLX7 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
Col16a1Q8BLX7 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Col16a1Q8BLX7 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
Col16a1Q8BLX7 AC164433.2-201ENSMUST00000226346 1701 ntBASIC29.95■■■□□ 2.38
Col16a1Q8BLX7 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC29.95■■■□□ 2.38
Col16a1Q8BLX7 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC29.94■■■□□ 2.38
Col16a1Q8BLX7 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Col16a1Q8BLX7 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
Col16a1Q8BLX7 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC29.94■■■□□ 2.38
Col16a1Q8BLX7 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Col16a1Q8BLX7 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC29.93■■■□□ 2.38
Col16a1Q8BLX7 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Col16a1Q8BLX7 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Col16a1Q8BLX7 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC29.92■■■□□ 2.38
Col16a1Q8BLX7 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC29.92■■■□□ 2.38
Col16a1Q8BLX7 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
Col16a1Q8BLX7 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
Col16a1Q8BLX7 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Col16a1Q8BLX7 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
Col16a1Q8BLX7 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC29.91■■■□□ 2.38
Col16a1Q8BLX7 Gm5131-201ENSMUST00000212776 1238 ntBASIC29.91■■■□□ 2.38
Col16a1Q8BLX7 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Col16a1Q8BLX7 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC29.9■■■□□ 2.38
Col16a1Q8BLX7 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC29.9■■■□□ 2.38
Col16a1Q8BLX7 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC29.9■■■□□ 2.38
Col16a1Q8BLX7 Etf1-202ENSMUST00000180351 108 ntBASIC29.89■■■□□ 2.38
Col16a1Q8BLX7 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC29.89■■■□□ 2.38
Col16a1Q8BLX7 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Col16a1Q8BLX7 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Col16a1Q8BLX7 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Col16a1Q8BLX7 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC29.88■■■□□ 2.37
Col16a1Q8BLX7 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC29.88■■■□□ 2.37
Col16a1Q8BLX7 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Col16a1Q8BLX7 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC29.87■■■□□ 2.37
Col16a1Q8BLX7 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC29.87■■■□□ 2.37
Col16a1Q8BLX7 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Col16a1Q8BLX7 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Col16a1Q8BLX7 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC29.85■■■□□ 2.37
Col16a1Q8BLX7 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC29.85■■■□□ 2.37
Col16a1Q8BLX7 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC29.85■■■□□ 2.37
Col16a1Q8BLX7 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC29.85■■■□□ 2.37
Col16a1Q8BLX7 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Col16a1Q8BLX7 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Col16a1Q8BLX7 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Col16a1Q8BLX7 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC29.84■■■□□ 2.37
Col16a1Q8BLX7 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC29.84■■■□□ 2.37
Col16a1Q8BLX7 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Col16a1Q8BLX7 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
Col16a1Q8BLX7 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
Col16a1Q8BLX7 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Col16a1Q8BLX7 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Col16a1Q8BLX7 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Col16a1Q8BLX7 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC29.82■■■□□ 2.36
Col16a1Q8BLX7 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Col16a1Q8BLX7 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC29.81■■■□□ 2.36
Col16a1Q8BLX7 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC29.81■■■□□ 2.36
Col16a1Q8BLX7 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Col16a1Q8BLX7 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC29.81■■■□□ 2.36
Col16a1Q8BLX7 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC29.81■■■□□ 2.36
Col16a1Q8BLX7 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Col16a1Q8BLX7 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC29.8■■■□□ 2.36
Col16a1Q8BLX7 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Col16a1Q8BLX7 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC29.8■■■□□ 2.36
Col16a1Q8BLX7 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Col16a1Q8BLX7 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
Col16a1Q8BLX7 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
Col16a1Q8BLX7 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
Col16a1Q8BLX7 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Col16a1Q8BLX7 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC29.76■■■□□ 2.35
Col16a1Q8BLX7 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Col16a1Q8BLX7 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Col16a1Q8BLX7 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC29.75■■■□□ 2.35
Col16a1Q8BLX7 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Col16a1Q8BLX7 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Col16a1Q8BLX7 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Col16a1Q8BLX7 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC29.73■■■□□ 2.35
Retrieved 100 of 76,532 protein–RNA pairs in 157.9 ms