Protein–RNA interactions for Protein: Q8BHD0

Rab39a, Ras-related protein Rab-39A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab39aQ8BHD0 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rab39aQ8BHD0 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rab39aQ8BHD0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Rab39aQ8BHD0 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rab39aQ8BHD0 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rab39aQ8BHD0 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.27■□□□□ 0.84
Rab39aQ8BHD0 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.27■□□□□ 0.84
Rab39aQ8BHD0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rab39aQ8BHD0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.27■□□□□ 0.84
Rab39aQ8BHD0 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Rab39aQ8BHD0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rab39aQ8BHD0 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rab39aQ8BHD0 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rab39aQ8BHD0 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rab39aQ8BHD0 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rab39aQ8BHD0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Rab39aQ8BHD0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Rab39aQ8BHD0 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rab39aQ8BHD0 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rab39aQ8BHD0 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.25■□□□□ 0.83
Rab39aQ8BHD0 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rab39aQ8BHD0 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Rab39aQ8BHD0 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Rab39aQ8BHD0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rab39aQ8BHD0 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.24■□□□□ 0.83
Rab39aQ8BHD0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rab39aQ8BHD0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.24■□□□□ 0.83
Rab39aQ8BHD0 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Rab39aQ8BHD0 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rab39aQ8BHD0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rab39aQ8BHD0 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Rab39aQ8BHD0 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rab39aQ8BHD0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rab39aQ8BHD0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rab39aQ8BHD0 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rab39aQ8BHD0 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rab39aQ8BHD0 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Rab39aQ8BHD0 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.22■□□□□ 0.83
Rab39aQ8BHD0 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.22■□□□□ 0.83
Rab39aQ8BHD0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Rab39aQ8BHD0 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rab39aQ8BHD0 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rab39aQ8BHD0 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rab39aQ8BHD0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rab39aQ8BHD0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rab39aQ8BHD0 Gm11599-201ENSMUST00000118720 878 ntBASIC20.21■□□□□ 0.83
Rab39aQ8BHD0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rab39aQ8BHD0 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rab39aQ8BHD0 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Rab39aQ8BHD0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rab39aQ8BHD0 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rab39aQ8BHD0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rab39aQ8BHD0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rab39aQ8BHD0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rab39aQ8BHD0 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rab39aQ8BHD0 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Rab39aQ8BHD0 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.19■□□□□ 0.82
Rab39aQ8BHD0 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rab39aQ8BHD0 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rab39aQ8BHD0 Gm37136-201ENSMUST00000194368 194 ntBASIC20.18■□□□□ 0.82
Rab39aQ8BHD0 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Rab39aQ8BHD0 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rab39aQ8BHD0 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rab39aQ8BHD0 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rab39aQ8BHD0 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.18■□□□□ 0.82
Rab39aQ8BHD0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rab39aQ8BHD0 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rab39aQ8BHD0 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rab39aQ8BHD0 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rab39aQ8BHD0 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rab39aQ8BHD0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rab39aQ8BHD0 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rab39aQ8BHD0 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rab39aQ8BHD0 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rab39aQ8BHD0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rab39aQ8BHD0 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Rab39aQ8BHD0 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Rab39aQ8BHD0 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rab39aQ8BHD0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rab39aQ8BHD0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.15■□□□□ 0.82
Rab39aQ8BHD0 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.15■□□□□ 0.82
Rab39aQ8BHD0 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Rab39aQ8BHD0 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rab39aQ8BHD0 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Rab39aQ8BHD0 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rab39aQ8BHD0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rab39aQ8BHD0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rab39aQ8BHD0 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rab39aQ8BHD0 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rab39aQ8BHD0 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rab39aQ8BHD0 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.13■□□□□ 0.81
Rab39aQ8BHD0 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rab39aQ8BHD0 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rab39aQ8BHD0 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rab39aQ8BHD0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Rab39aQ8BHD0 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Rab39aQ8BHD0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rab39aQ8BHD0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rab39aQ8BHD0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rab39aQ8BHD0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms