Protein–RNA interactions for Protein: Q6PDM2

Srsf1, Serine/arginine-rich splicing factor 1, mousemouse

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srsf1Q6PDM2 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Srsf1Q6PDM2 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.48■□□□□ 0.71
Srsf1Q6PDM2 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Srsf1Q6PDM2 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.48■□□□□ 0.71
Srsf1Q6PDM2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.48■□□□□ 0.71
Srsf1Q6PDM2 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Srsf1Q6PDM2 Gm12821-201ENSMUST00000120022 600 ntBASIC19.47■□□□□ 0.71
Srsf1Q6PDM2 Gm22238-201ENSMUST00000175222 88 ntBASIC19.47■□□□□ 0.71
Srsf1Q6PDM2 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Srsf1Q6PDM2 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Srsf1Q6PDM2 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Srsf1Q6PDM2 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Srsf1Q6PDM2 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Srsf1Q6PDM2 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.46■□□□□ 0.71
Srsf1Q6PDM2 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Srsf1Q6PDM2 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Srsf1Q6PDM2 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Srsf1Q6PDM2 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.45■□□□□ 0.7
Srsf1Q6PDM2 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Srsf1Q6PDM2 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.44■□□□□ 0.7
Srsf1Q6PDM2 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Srsf1Q6PDM2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Srsf1Q6PDM2 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Srsf1Q6PDM2 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.44■□□□□ 0.7
Srsf1Q6PDM2 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Srsf1Q6PDM2 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Srsf1Q6PDM2 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Srsf1Q6PDM2 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Srsf1Q6PDM2 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.43■□□□□ 0.7
Srsf1Q6PDM2 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Srsf1Q6PDM2 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Srsf1Q6PDM2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Srsf1Q6PDM2 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Srsf1Q6PDM2 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Srsf1Q6PDM2 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Srsf1Q6PDM2 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.41■□□□□ 0.7
Srsf1Q6PDM2 Gm27454-201ENSMUST00000185090 204 ntBASIC19.41■□□□□ 0.7
Srsf1Q6PDM2 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.41■□□□□ 0.7
Srsf1Q6PDM2 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.41■□□□□ 0.7
Srsf1Q6PDM2 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Srsf1Q6PDM2 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.4■□□□□ 0.7
Srsf1Q6PDM2 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.4■□□□□ 0.7
Srsf1Q6PDM2 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Srsf1Q6PDM2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Srsf1Q6PDM2 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Srsf1Q6PDM2 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Srsf1Q6PDM2 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.39■□□□□ 0.69
Srsf1Q6PDM2 Gm45417-201ENSMUST00000209533 758 ntBASIC19.39■□□□□ 0.69
Srsf1Q6PDM2 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Srsf1Q6PDM2 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Srsf1Q6PDM2 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Srsf1Q6PDM2 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Srsf1Q6PDM2 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.38■□□□□ 0.69
Srsf1Q6PDM2 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Srsf1Q6PDM2 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Srsf1Q6PDM2 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Srsf1Q6PDM2 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Srsf1Q6PDM2 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.37■□□□□ 0.69
Srsf1Q6PDM2 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Srsf1Q6PDM2 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Srsf1Q6PDM2 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.37■□□□□ 0.69
Srsf1Q6PDM2 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Srsf1Q6PDM2 Gm12922-201ENSMUST00000120626 809 ntBASIC19.36■□□□□ 0.69
Srsf1Q6PDM2 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.36■□□□□ 0.69
Srsf1Q6PDM2 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Srsf1Q6PDM2 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Srsf1Q6PDM2 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Srsf1Q6PDM2 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.35■□□□□ 0.69
Srsf1Q6PDM2 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Srsf1Q6PDM2 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.35■□□□□ 0.69
Srsf1Q6PDM2 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Srsf1Q6PDM2 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Srsf1Q6PDM2 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.34■□□□□ 0.69
Srsf1Q6PDM2 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Srsf1Q6PDM2 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Srsf1Q6PDM2 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Srsf1Q6PDM2 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Srsf1Q6PDM2 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Srsf1Q6PDM2 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Srsf1Q6PDM2 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.33■□□□□ 0.68
Srsf1Q6PDM2 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Srsf1Q6PDM2 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Srsf1Q6PDM2 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Srsf1Q6PDM2 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Srsf1Q6PDM2 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Srsf1Q6PDM2 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Srsf1Q6PDM2 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.32■□□□□ 0.68
Srsf1Q6PDM2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Srsf1Q6PDM2 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Srsf1Q6PDM2 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Srsf1Q6PDM2 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Srsf1Q6PDM2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Srsf1Q6PDM2 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Srsf1Q6PDM2 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.31■□□□□ 0.68
Srsf1Q6PDM2 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Srsf1Q6PDM2 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Srsf1Q6PDM2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Srsf1Q6PDM2 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Srsf1Q6PDM2 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Srsf1Q6PDM2 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms