Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Sox17Q61473 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sox17Q61473 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Sox17Q61473 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
Sox17Q61473 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sox17Q61473 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sox17Q61473 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Sox17Q61473 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Sox17Q61473 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sox17Q61473 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.72■□□□□ 0.91
Sox17Q61473 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sox17Q61473 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Sox17Q61473 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sox17Q61473 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sox17Q61473 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sox17Q61473 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sox17Q61473 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sox17Q61473 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sox17Q61473 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sox17Q61473 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sox17Q61473 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.7■□□□□ 0.9
Sox17Q61473 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Sox17Q61473 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Sox17Q61473 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sox17Q61473 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sox17Q61473 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sox17Q61473 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sox17Q61473 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sox17Q61473 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sox17Q61473 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sox17Q61473 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Sox17Q61473 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sox17Q61473 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sox17Q61473 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sox17Q61473 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sox17Q61473 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sox17Q61473 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Sox17Q61473 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sox17Q61473 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.65■□□□□ 0.9
Sox17Q61473 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.65■□□□□ 0.9
Sox17Q61473 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Sox17Q61473 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sox17Q61473 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sox17Q61473 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sox17Q61473 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sox17Q61473 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sox17Q61473 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sox17Q61473 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sox17Q61473 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sox17Q61473 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sox17Q61473 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Sox17Q61473 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sox17Q61473 Nkain2-201ENSMUST00000092602 558 ntBASIC20.61■□□□□ 0.89
Sox17Q61473 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sox17Q61473 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sox17Q61473 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.61■□□□□ 0.89
Sox17Q61473 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Sox17Q61473 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sox17Q61473 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sox17Q61473 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sox17Q61473 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Sox17Q61473 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sox17Q61473 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sox17Q61473 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sox17Q61473 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sox17Q61473 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sox17Q61473 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sox17Q61473 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.59■□□□□ 0.89
Sox17Q61473 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sox17Q61473 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sox17Q61473 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.59■□□□□ 0.89
Sox17Q61473 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sox17Q61473 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sox17Q61473 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Sox17Q61473 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sox17Q61473 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sox17Q61473 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sox17Q61473 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sox17Q61473 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
Sox17Q61473 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.58■□□□□ 0.88
Sox17Q61473 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sox17Q61473 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Sox17Q61473 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Sox17Q61473 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Sox17Q61473 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sox17Q61473 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sox17Q61473 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.56■□□□□ 0.88
Sox17Q61473 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sox17Q61473 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sox17Q61473 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sox17Q61473 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sox17Q61473 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Sox17Q61473 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sox17Q61473 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sox17Q61473 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sox17Q61473 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sox17Q61473 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.55■□□□□ 0.88
Sox17Q61473 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Sox17Q61473 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sox17Q61473 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms