Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Ubr3Q5U430 Gm21956-201ENSMUST00000179946 522 ntBASIC27.93■■■□□ 2.06
Ubr3Q5U430 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Ubr3Q5U430 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC27.92■■■□□ 2.06
Ubr3Q5U430 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC27.92■■■□□ 2.06
Ubr3Q5U430 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.06
Ubr3Q5U430 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Ubr3Q5U430 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Ubr3Q5U430 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Ubr3Q5U430 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC27.91■■■□□ 2.06
Ubr3Q5U430 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Ubr3Q5U430 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Ubr3Q5U430 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Ubr3Q5U430 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC27.91■■■□□ 2.06
Ubr3Q5U430 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Ubr3Q5U430 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC27.9■■■□□ 2.06
Ubr3Q5U430 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC27.9■■■□□ 2.06
Ubr3Q5U430 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC27.89■■■□□ 2.06
Ubr3Q5U430 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Ubr3Q5U430 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Ubr3Q5U430 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Ubr3Q5U430 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC27.86■■■□□ 2.05
Ubr3Q5U430 Amer2-203ENSMUST00000225247 2662 ntBASIC27.85■■■□□ 2.05
Ubr3Q5U430 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC27.85■■■□□ 2.05
Ubr3Q5U430 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Ubr3Q5U430 Gm7199-201ENSMUST00000118327 1485 ntBASIC27.85■■■□□ 2.05
Ubr3Q5U430 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC27.85■■■□□ 2.05
Ubr3Q5U430 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC27.85■■■□□ 2.05
Ubr3Q5U430 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC27.84■■■□□ 2.05
Ubr3Q5U430 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Ubr3Q5U430 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC27.84■■■□□ 2.05
Ubr3Q5U430 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC27.84■■■□□ 2.05
Ubr3Q5U430 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC27.84■■■□□ 2.05
Ubr3Q5U430 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC27.84■■■□□ 2.05
Ubr3Q5U430 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC27.84■■■□□ 2.05
Ubr3Q5U430 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Ubr3Q5U430 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.04
Ubr3Q5U430 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC27.82■■■□□ 2.04
Ubr3Q5U430 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC27.82■■■□□ 2.04
Ubr3Q5U430 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Ubr3Q5U430 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC27.81■■■□□ 2.04
Ubr3Q5U430 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC27.81■■■□□ 2.04
Ubr3Q5U430 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC27.8■■■□□ 2.04
Ubr3Q5U430 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC27.8■■■□□ 2.04
Ubr3Q5U430 Gm13241-201ENSMUST00000094493 780 ntBASIC27.8■■■□□ 2.04
Ubr3Q5U430 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC27.79■■■□□ 2.04
Ubr3Q5U430 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Ubr3Q5U430 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Ubr3Q5U430 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
Ubr3Q5U430 Gm16464-201ENSMUST00000117815 1095 ntBASIC27.78■■■□□ 2.04
Ubr3Q5U430 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Ubr3Q5U430 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC27.78■■■□□ 2.04
Ubr3Q5U430 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Ubr3Q5U430 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Ubr3Q5U430 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Ubr3Q5U430 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC27.76■■■□□ 2.04
Ubr3Q5U430 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Ubr3Q5U430 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Ubr3Q5U430 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Ubr3Q5U430 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC27.75■■■□□ 2.03
Ubr3Q5U430 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC27.75■■■□□ 2.03
Ubr3Q5U430 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC27.75■■■□□ 2.03
Ubr3Q5U430 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Ubr3Q5U430 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC27.74■■■□□ 2.03
Ubr3Q5U430 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Ubr3Q5U430 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Ubr3Q5U430 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Ubr3Q5U430 AC164433.2-201ENSMUST00000226346 1701 ntBASIC27.74■■■□□ 2.03
Ubr3Q5U430 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Ubr3Q5U430 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC27.74■■■□□ 2.03
Ubr3Q5U430 Serp2-204ENSMUST00000228055 705 ntBASIC27.73■■■□□ 2.03
Ubr3Q5U430 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC27.73■■■□□ 2.03
Ubr3Q5U430 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
Ubr3Q5U430 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Ubr3Q5U430 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Ubr3Q5U430 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Ubr3Q5U430 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Ubr3Q5U430 Gm22238-201ENSMUST00000175222 88 ntBASIC27.72■■■□□ 2.03
Ubr3Q5U430 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC27.71■■■□□ 2.03
Ubr3Q5U430 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Ubr3Q5U430 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
Ubr3Q5U430 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
Ubr3Q5U430 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
Ubr3Q5U430 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC27.7■■■□□ 2.03
Ubr3Q5U430 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
Ubr3Q5U430 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
Ubr3Q5U430 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
Ubr3Q5U430 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC27.7■■■□□ 2.02
Ubr3Q5U430 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC27.69■■■□□ 2.02
Ubr3Q5U430 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC27.69■■■□□ 2.02
Ubr3Q5U430 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC27.69■■■□□ 2.02
Ubr3Q5U430 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Ubr3Q5U430 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Ubr3Q5U430 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC27.69■■■□□ 2.02
Ubr3Q5U430 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC27.68■■■□□ 2.02
Ubr3Q5U430 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC27.68■■■□□ 2.02
Ubr3Q5U430 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC27.68■■■□□ 2.02
Ubr3Q5U430 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC27.68■■■□□ 2.02
Ubr3Q5U430 Gm43034-201ENSMUST00000198678 1364 ntBASIC27.67■■■□□ 2.02
Ubr3Q5U430 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC27.67■■■□□ 2.02
Retrieved 100 of 76,532 protein–RNA pairs in 135.7 ms