Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav6-2Q5R1I4 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav6-2Q5R1I4 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav6-2Q5R1I4 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.59■□□□□ 0.73
Trav6-2Q5R1I4 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Trav6-2Q5R1I4 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav6-2Q5R1I4 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trav6-2Q5R1I4 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.58■□□□□ 0.72
Trav6-2Q5R1I4 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trav6-2Q5R1I4 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trav6-2Q5R1I4 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trav6-2Q5R1I4 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav6-2Q5R1I4 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav6-2Q5R1I4 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav6-2Q5R1I4 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav6-2Q5R1I4 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav6-2Q5R1I4 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav6-2Q5R1I4 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav6-2Q5R1I4 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trav6-2Q5R1I4 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trav6-2Q5R1I4 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav6-2Q5R1I4 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav6-2Q5R1I4 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav6-2Q5R1I4 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trav6-2Q5R1I4 Gm45102-201ENSMUST00000207427 857 ntBASIC19.54■□□□□ 0.72
Trav6-2Q5R1I4 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav6-2Q5R1I4 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trav6-2Q5R1I4 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav6-2Q5R1I4 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav6-2Q5R1I4 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav6-2Q5R1I4 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.53■□□□□ 0.72
Trav6-2Q5R1I4 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.53■□□□□ 0.72
Trav6-2Q5R1I4 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.53■□□□□ 0.72
Trav6-2Q5R1I4 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav6-2Q5R1I4 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Trav6-2Q5R1I4 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav6-2Q5R1I4 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav6-2Q5R1I4 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav6-2Q5R1I4 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trav6-2Q5R1I4 Gm14117-201ENSMUST00000122417 843 ntBASIC19.51■□□□□ 0.71
Trav6-2Q5R1I4 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav6-2Q5R1I4 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav6-2Q5R1I4 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Trav6-2Q5R1I4 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trav6-2Q5R1I4 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav6-2Q5R1I4 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav6-2Q5R1I4 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav6-2Q5R1I4 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trav6-2Q5R1I4 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav6-2Q5R1I4 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav6-2Q5R1I4 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.5■□□□□ 0.71
Trav6-2Q5R1I4 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Trav6-2Q5R1I4 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Trav6-2Q5R1I4 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav6-2Q5R1I4 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav6-2Q5R1I4 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Trav6-2Q5R1I4 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav6-2Q5R1I4 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav6-2Q5R1I4 Gm10232-201ENSMUST00000089221 720 ntBASIC19.49■□□□□ 0.71
Trav6-2Q5R1I4 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trav6-2Q5R1I4 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.49■□□□□ 0.71
Trav6-2Q5R1I4 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav6-2Q5R1I4 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav6-2Q5R1I4 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav6-2Q5R1I4 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav6-2Q5R1I4 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav6-2Q5R1I4 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav6-2Q5R1I4 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Trav6-2Q5R1I4 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav6-2Q5R1I4 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav6-2Q5R1I4 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav6-2Q5R1I4 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.47■□□□□ 0.71
Trav6-2Q5R1I4 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.47■□□□□ 0.71
Trav6-2Q5R1I4 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Trav6-2Q5R1I4 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav6-2Q5R1I4 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav6-2Q5R1I4 Gm9959-201ENSMUST00000068277 390 ntBASIC19.46■□□□□ 0.71
Trav6-2Q5R1I4 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav6-2Q5R1I4 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav6-2Q5R1I4 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Trav6-2Q5R1I4 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.45■□□□□ 0.7
Trav6-2Q5R1I4 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav6-2Q5R1I4 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav6-2Q5R1I4 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trav6-2Q5R1I4 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav6-2Q5R1I4 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Trav6-2Q5R1I4 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav6-2Q5R1I4 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav6-2Q5R1I4 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav6-2Q5R1I4 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav6-2Q5R1I4 Gm15039-201ENSMUST00000118914 875 ntBASIC19.43■□□□□ 0.7
Trav6-2Q5R1I4 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.43■□□□□ 0.7
Trav6-2Q5R1I4 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav6-2Q5R1I4 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav6-2Q5R1I4 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Trav6-2Q5R1I4 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav6-2Q5R1I4 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Trav6-2Q5R1I4 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Trav6-2Q5R1I4 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.42■□□□□ 0.7
Trav6-2Q5R1I4 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms