Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav7-2Q5R1I3 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trav7-2Q5R1I3 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav7-2Q5R1I3 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav7-2Q5R1I3 Gm12818-201ENSMUST00000117562 1349 ntBASIC16.29■□□□□ 0.2
Trav7-2Q5R1I3 Gm9812-201ENSMUST00000061934 968 ntBASIC16.29■□□□□ 0.2
Trav7-2Q5R1I3 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav7-2Q5R1I3 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav7-2Q5R1I3 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav7-2Q5R1I3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav7-2Q5R1I3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav7-2Q5R1I3 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav7-2Q5R1I3 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav7-2Q5R1I3 AC153911.1-201ENSMUST00000220378 758 ntBASIC16.28■□□□□ 0.2
Trav7-2Q5R1I3 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav7-2Q5R1I3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav7-2Q5R1I3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav7-2Q5R1I3 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trav7-2Q5R1I3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav7-2Q5R1I3 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Trav7-2Q5R1I3 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav7-2Q5R1I3 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC16.27■□□□□ 0.2
Trav7-2Q5R1I3 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC16.27■□□□□ 0.2
Trav7-2Q5R1I3 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav7-2Q5R1I3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC16.26■□□□□ 0.19
Trav7-2Q5R1I3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav7-2Q5R1I3 AC122317.2-201ENSMUST00000218708 1248 ntBASIC16.26■□□□□ 0.19
Trav7-2Q5R1I3 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav7-2Q5R1I3 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trav7-2Q5R1I3 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav7-2Q5R1I3 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav7-2Q5R1I3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav7-2Q5R1I3 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav7-2Q5R1I3 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav7-2Q5R1I3 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC16.25■□□□□ 0.19
Trav7-2Q5R1I3 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Trav7-2Q5R1I3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav7-2Q5R1I3 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav7-2Q5R1I3 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trav7-2Q5R1I3 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav7-2Q5R1I3 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav7-2Q5R1I3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC16.24■□□□□ 0.19
Trav7-2Q5R1I3 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trav7-2Q5R1I3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav7-2Q5R1I3 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav7-2Q5R1I3 Gm45364-201ENSMUST00000210883 159 ntBASIC16.23■□□□□ 0.19
Trav7-2Q5R1I3 Pkd1-207ENSMUST00000228550 1050 ntBASIC16.23■□□□□ 0.19
Trav7-2Q5R1I3 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC16.23■□□□□ 0.19
Trav7-2Q5R1I3 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav7-2Q5R1I3 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Trav7-2Q5R1I3 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav7-2Q5R1I3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav7-2Q5R1I3 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav7-2Q5R1I3 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav7-2Q5R1I3 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav7-2Q5R1I3 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Trav7-2Q5R1I3 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav7-2Q5R1I3 Gm6311-201ENSMUST00000073790 878 ntBASIC16.22■□□□□ 0.19
Trav7-2Q5R1I3 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav7-2Q5R1I3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav7-2Q5R1I3 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav7-2Q5R1I3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav7-2Q5R1I3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav7-2Q5R1I3 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav7-2Q5R1I3 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trav7-2Q5R1I3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav7-2Q5R1I3 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav7-2Q5R1I3 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav7-2Q5R1I3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav7-2Q5R1I3 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav7-2Q5R1I3 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav7-2Q5R1I3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav7-2Q5R1I3 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC16.21■□□□□ 0.19
Trav7-2Q5R1I3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav7-2Q5R1I3 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav7-2Q5R1I3 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Trav7-2Q5R1I3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC16.2■□□□□ 0.18
Trav7-2Q5R1I3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7-2Q5R1I3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7-2Q5R1I3 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7-2Q5R1I3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7-2Q5R1I3 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trav7-2Q5R1I3 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7-2Q5R1I3 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC16.2■□□□□ 0.18
Trav7-2Q5R1I3 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7-2Q5R1I3 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav7-2Q5R1I3 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Trav7-2Q5R1I3 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav7-2Q5R1I3 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC16.19■□□□□ 0.18
Trav7-2Q5R1I3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav7-2Q5R1I3 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav7-2Q5R1I3 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trav7-2Q5R1I3 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav7-2Q5R1I3 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav7-2Q5R1I3 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav7-2Q5R1I3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav7-2Q5R1I3 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav7-2Q5R1I3 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav7-2Q5R1I3 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trav7-2Q5R1I3 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 134.3 ms