Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav8d-1Q5R1H8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Trav8d-1Q5R1H8 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav8d-1Q5R1H8 Gm26766-202ENSMUST00000227544 2347 ntBASIC18■□□□□ 0.47
Trav8d-1Q5R1H8 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav8d-1Q5R1H8 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Trav8d-1Q5R1H8 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trav8d-1Q5R1H8 Gm30023-201ENSMUST00000197970 889 ntBASIC18■□□□□ 0.47
Trav8d-1Q5R1H8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav8d-1Q5R1H8 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Trav8d-1Q5R1H8 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav8d-1Q5R1H8 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav8d-1Q5R1H8 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav8d-1Q5R1H8 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.99■□□□□ 0.47
Trav8d-1Q5R1H8 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav8d-1Q5R1H8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav8d-1Q5R1H8 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav8d-1Q5R1H8 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav8d-1Q5R1H8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav8d-1Q5R1H8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav8d-1Q5R1H8 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav8d-1Q5R1H8 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav8d-1Q5R1H8 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav8d-1Q5R1H8 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav8d-1Q5R1H8 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav8d-1Q5R1H8 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
Trav8d-1Q5R1H8 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav8d-1Q5R1H8 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav8d-1Q5R1H8 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Trav8d-1Q5R1H8 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Trav8d-1Q5R1H8 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav8d-1Q5R1H8 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC17.97■□□□□ 0.47
Trav8d-1Q5R1H8 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav8d-1Q5R1H8 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Trav8d-1Q5R1H8 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Trav8d-1Q5R1H8 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.96■□□□□ 0.47
Trav8d-1Q5R1H8 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Trav8d-1Q5R1H8 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav8d-1Q5R1H8 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav8d-1Q5R1H8 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav8d-1Q5R1H8 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trav8d-1Q5R1H8 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC17.95■□□□□ 0.46
Trav8d-1Q5R1H8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav8d-1Q5R1H8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav8d-1Q5R1H8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav8d-1Q5R1H8 Gm7432-201ENSMUST00000210343 879 ntBASIC17.95■□□□□ 0.46
Trav8d-1Q5R1H8 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav8d-1Q5R1H8 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.95■□□□□ 0.46
Trav8d-1Q5R1H8 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav8d-1Q5R1H8 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trav8d-1Q5R1H8 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav8d-1Q5R1H8 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav8d-1Q5R1H8 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav8d-1Q5R1H8 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Trav8d-1Q5R1H8 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav8d-1Q5R1H8 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav8d-1Q5R1H8 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Trav8d-1Q5R1H8 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav8d-1Q5R1H8 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC17.93■□□□□ 0.46
Trav8d-1Q5R1H8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trav8d-1Q5R1H8 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trav8d-1Q5R1H8 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav8d-1Q5R1H8 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Trav8d-1Q5R1H8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC17.93■□□□□ 0.46
Trav8d-1Q5R1H8 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.92■□□□□ 0.46
Trav8d-1Q5R1H8 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav8d-1Q5R1H8 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.92■□□□□ 0.46
Trav8d-1Q5R1H8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC17.92■□□□□ 0.46
Trav8d-1Q5R1H8 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Trav8d-1Q5R1H8 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav8d-1Q5R1H8 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav8d-1Q5R1H8 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav8d-1Q5R1H8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC17.91■□□□□ 0.46
Trav8d-1Q5R1H8 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav8d-1Q5R1H8 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav8d-1Q5R1H8 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav8d-1Q5R1H8 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav8d-1Q5R1H8 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav8d-1Q5R1H8 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav8d-1Q5R1H8 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trav8d-1Q5R1H8 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav8d-1Q5R1H8 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav8d-1Q5R1H8 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav8d-1Q5R1H8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC17.9■□□□□ 0.46
Trav8d-1Q5R1H8 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav8d-1Q5R1H8 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav8d-1Q5R1H8 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trav8d-1Q5R1H8 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav8d-1Q5R1H8 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav8d-1Q5R1H8 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav8d-1Q5R1H8 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav8d-1Q5R1H8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav8d-1Q5R1H8 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav8d-1Q5R1H8 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav8d-1Q5R1H8 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Trav8d-1Q5R1H8 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav8d-1Q5R1H8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav8d-1Q5R1H8 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav8d-1Q5R1H8 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav8d-1Q5R1H8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms