Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Vps13aQ5H8C4 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Vps13aQ5H8C4 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Vps13aQ5H8C4 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Vps13aQ5H8C4 Gm27454-201ENSMUST00000185090 204 ntBASIC22.64■■□□□ 1.21
Vps13aQ5H8C4 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Vps13aQ5H8C4 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Vps13aQ5H8C4 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.64■■□□□ 1.21
Vps13aQ5H8C4 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Vps13aQ5H8C4 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC22.63■■□□□ 1.21
Vps13aQ5H8C4 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.63■■□□□ 1.21
Vps13aQ5H8C4 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Vps13aQ5H8C4 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC22.61■■□□□ 1.21
Vps13aQ5H8C4 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Vps13aQ5H8C4 AC140930.3-201ENSMUST00000222935 274 ntBASIC22.6■■□□□ 1.21
Vps13aQ5H8C4 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Vps13aQ5H8C4 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC22.6■■□□□ 1.21
Vps13aQ5H8C4 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Vps13aQ5H8C4 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Vps13aQ5H8C4 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC22.59■■□□□ 1.21
Vps13aQ5H8C4 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Vps13aQ5H8C4 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Vps13aQ5H8C4 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Vps13aQ5H8C4 Gm12922-201ENSMUST00000120626 809 ntBASIC22.57■■□□□ 1.2
Vps13aQ5H8C4 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Vps13aQ5H8C4 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Vps13aQ5H8C4 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.57■■□□□ 1.2
Vps13aQ5H8C4 Appbp2os-202ENSMUST00000206972 447 ntBASIC22.56■■□□□ 1.2
Vps13aQ5H8C4 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
Vps13aQ5H8C4 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
Vps13aQ5H8C4 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Vps13aQ5H8C4 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Vps13aQ5H8C4 AC164629.5-201ENSMUST00000220387 632 ntBASIC22.55■■□□□ 1.2
Vps13aQ5H8C4 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Vps13aQ5H8C4 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC22.55■■□□□ 1.2
Vps13aQ5H8C4 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.55■■□□□ 1.2
Vps13aQ5H8C4 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.55■■□□□ 1.2
Vps13aQ5H8C4 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Vps13aQ5H8C4 Gm7417-201ENSMUST00000192950 473 ntBASIC22.54■■□□□ 1.2
Vps13aQ5H8C4 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC22.54■■□□□ 1.2
Vps13aQ5H8C4 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Vps13aQ5H8C4 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Vps13aQ5H8C4 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Vps13aQ5H8C4 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Vps13aQ5H8C4 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Vps13aQ5H8C4 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Vps13aQ5H8C4 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC22.52■■□□□ 1.2
Vps13aQ5H8C4 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.52■■□□□ 1.2
Vps13aQ5H8C4 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Vps13aQ5H8C4 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC22.52■■□□□ 1.2
Vps13aQ5H8C4 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Vps13aQ5H8C4 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Vps13aQ5H8C4 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC22.51■■□□□ 1.19
Vps13aQ5H8C4 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Vps13aQ5H8C4 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Vps13aQ5H8C4 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC22.51■■□□□ 1.19
Vps13aQ5H8C4 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Vps13aQ5H8C4 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Vps13aQ5H8C4 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
Vps13aQ5H8C4 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC22.49■■□□□ 1.19
Vps13aQ5H8C4 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Vps13aQ5H8C4 Gm8495-201ENSMUST00000188740 694 ntBASIC22.48■■□□□ 1.19
Vps13aQ5H8C4 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Vps13aQ5H8C4 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.48■■□□□ 1.19
Vps13aQ5H8C4 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Vps13aQ5H8C4 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
Vps13aQ5H8C4 Gm12821-201ENSMUST00000120022 600 ntBASIC22.48■■□□□ 1.19
Vps13aQ5H8C4 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Vps13aQ5H8C4 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC22.48■■□□□ 1.19
Vps13aQ5H8C4 Gm22238-201ENSMUST00000175222 88 ntBASIC22.48■■□□□ 1.19
Vps13aQ5H8C4 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Vps13aQ5H8C4 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Vps13aQ5H8C4 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Vps13aQ5H8C4 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
Vps13aQ5H8C4 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Vps13aQ5H8C4 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Vps13aQ5H8C4 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Vps13aQ5H8C4 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Vps13aQ5H8C4 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.46■■□□□ 1.19
Vps13aQ5H8C4 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Vps13aQ5H8C4 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Vps13aQ5H8C4 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC22.46■■□□□ 1.19
Vps13aQ5H8C4 AC116713.1-201ENSMUST00000215074 430 ntBASIC22.46■■□□□ 1.19
Vps13aQ5H8C4 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Vps13aQ5H8C4 Flvcr1-202ENSMUST00000191946 1216 ntBASIC22.45■■□□□ 1.18
Vps13aQ5H8C4 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Vps13aQ5H8C4 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Vps13aQ5H8C4 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Vps13aQ5H8C4 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.45■■□□□ 1.18
Vps13aQ5H8C4 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Vps13aQ5H8C4 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Vps13aQ5H8C4 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Vps13aQ5H8C4 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Vps13aQ5H8C4 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Vps13aQ5H8C4 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Vps13aQ5H8C4 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Vps13aQ5H8C4 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC22.43■■□□□ 1.18
Vps13aQ5H8C4 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Vps13aQ5H8C4 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Vps13aQ5H8C4 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC22.42■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms