Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Col10a1Q05306 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col10a1Q05306 Gm14523-201ENSMUST00000117260 558 ntBASIC20.36■□□□□ 0.85
Col10a1Q05306 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Col10a1Q05306 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Col10a1Q05306 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Col10a1Q05306 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Col10a1Q05306 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Col10a1Q05306 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Col10a1Q05306 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col10a1Q05306 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
Col10a1Q05306 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.34■□□□□ 0.85
Col10a1Q05306 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Col10a1Q05306 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.34■□□□□ 0.85
Col10a1Q05306 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Col10a1Q05306 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col10a1Q05306 Cap2-205ENSMUST00000225824 1634 ntBASIC20.34■□□□□ 0.85
Col10a1Q05306 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Col10a1Q05306 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col10a1Q05306 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Col10a1Q05306 Gm7332-201ENSMUST00000118351 454 ntBASIC20.33■□□□□ 0.85
Col10a1Q05306 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.33■□□□□ 0.85
Col10a1Q05306 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.33■□□□□ 0.85
Col10a1Q05306 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.33■□□□□ 0.85
Col10a1Q05306 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.33■□□□□ 0.85
Col10a1Q05306 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Col10a1Q05306 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Col10a1Q05306 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col10a1Q05306 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col10a1Q05306 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Col10a1Q05306 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col10a1Q05306 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.31■□□□□ 0.84
Col10a1Q05306 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.31■□□□□ 0.84
Col10a1Q05306 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col10a1Q05306 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col10a1Q05306 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col10a1Q05306 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col10a1Q05306 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col10a1Q05306 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col10a1Q05306 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Col10a1Q05306 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col10a1Q05306 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.29■□□□□ 0.84
Col10a1Q05306 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col10a1Q05306 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Col10a1Q05306 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.29■□□□□ 0.84
Col10a1Q05306 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col10a1Q05306 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col10a1Q05306 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col10a1Q05306 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col10a1Q05306 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.29■□□□□ 0.84
Col10a1Q05306 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col10a1Q05306 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col10a1Q05306 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col10a1Q05306 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col10a1Q05306 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col10a1Q05306 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col10a1Q05306 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Col10a1Q05306 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col10a1Q05306 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col10a1Q05306 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Col10a1Q05306 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.27■□□□□ 0.84
Col10a1Q05306 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Col10a1Q05306 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Col10a1Q05306 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Col10a1Q05306 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col10a1Q05306 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Col10a1Q05306 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col10a1Q05306 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col10a1Q05306 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Col10a1Q05306 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Col10a1Q05306 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col10a1Q05306 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Col10a1Q05306 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.25■□□□□ 0.83
Col10a1Q05306 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Col10a1Q05306 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Col10a1Q05306 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Col10a1Q05306 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col10a1Q05306 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Col10a1Q05306 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Col10a1Q05306 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col10a1Q05306 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Col10a1Q05306 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Col10a1Q05306 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col10a1Q05306 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Col10a1Q05306 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Col10a1Q05306 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col10a1Q05306 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col10a1Q05306 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Col10a1Q05306 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Col10a1Q05306 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Col10a1Q05306 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col10a1Q05306 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Col10a1Q05306 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.21■□□□□ 0.83
Col10a1Q05306 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col10a1Q05306 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.21■□□□□ 0.83
Col10a1Q05306 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Col10a1Q05306 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Col10a1Q05306 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col10a1Q05306 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Col10a1Q05306 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 168.2 ms