Protein–RNA interactions for Protein: P68433

Hist1h3a, Histone H3.1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3aP68433 Scarna2-201ENSMUST00000157560 414 ntBASIC19.3■□□□□ 0.68
Hist1h3aP68433 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.3■□□□□ 0.68
Hist1h3aP68433 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Hist1h3aP68433 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hist1h3aP68433 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hist1h3aP68433 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Hist1h3aP68433 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hist1h3aP68433 Gm9806-201ENSMUST00000051080 552 ntBASIC19.29■□□□□ 0.68
Hist1h3aP68433 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.28■□□□□ 0.68
Hist1h3aP68433 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hist1h3aP68433 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hist1h3aP68433 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hist1h3aP68433 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Hist1h3aP68433 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hist1h3aP68433 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Hist1h3aP68433 Gm44428-201ENSMUST00000204474 874 ntBASIC19.27■□□□□ 0.68
Hist1h3aP68433 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hist1h3aP68433 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Hist1h3aP68433 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hist1h3aP68433 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hist1h3aP68433 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hist1h3aP68433 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Hist1h3aP68433 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hist1h3aP68433 Gm16437-201ENSMUST00000025669 507 ntBASIC19.26■□□□□ 0.67
Hist1h3aP68433 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hist1h3aP68433 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hist1h3aP68433 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hist1h3aP68433 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Hist1h3aP68433 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Hist1h3aP68433 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hist1h3aP68433 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hist1h3aP68433 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.25■□□□□ 0.67
Hist1h3aP68433 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hist1h3aP68433 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hist1h3aP68433 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Hist1h3aP68433 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hist1h3aP68433 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hist1h3aP68433 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hist1h3aP68433 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Hist1h3aP68433 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Hist1h3aP68433 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.23■□□□□ 0.67
Hist1h3aP68433 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Hist1h3aP68433 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Hist1h3aP68433 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Hist1h3aP68433 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hist1h3aP68433 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hist1h3aP68433 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hist1h3aP68433 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.22■□□□□ 0.67
Hist1h3aP68433 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Hist1h3aP68433 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hist1h3aP68433 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hist1h3aP68433 Gm11687-201ENSMUST00000118911 886 ntBASIC19.21■□□□□ 0.67
Hist1h3aP68433 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hist1h3aP68433 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hist1h3aP68433 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hist1h3aP68433 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hist1h3aP68433 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hist1h3aP68433 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Hist1h3aP68433 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hist1h3aP68433 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.19■□□□□ 0.66
Hist1h3aP68433 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.19■□□□□ 0.66
Hist1h3aP68433 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hist1h3aP68433 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Hist1h3aP68433 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.19■□□□□ 0.66
Hist1h3aP68433 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hist1h3aP68433 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.19■□□□□ 0.66
Hist1h3aP68433 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Hist1h3aP68433 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.18■□□□□ 0.66
Hist1h3aP68433 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.18■□□□□ 0.66
Hist1h3aP68433 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Hist1h3aP68433 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Hist1h3aP68433 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.17■□□□□ 0.66
Hist1h3aP68433 Gm22567-201ENSMUST00000175542 342 ntBASIC19.16■□□□□ 0.66
Hist1h3aP68433 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.16■□□□□ 0.66
Hist1h3aP68433 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hist1h3aP68433 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hist1h3aP68433 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.15■□□□□ 0.66
Hist1h3aP68433 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Hist1h3aP68433 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hist1h3aP68433 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Hist1h3aP68433 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Hist1h3aP68433 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hist1h3aP68433 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Hist1h3aP68433 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hist1h3aP68433 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hist1h3aP68433 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
Hist1h3aP68433 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hist1h3aP68433 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hist1h3aP68433 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Hist1h3aP68433 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hist1h3aP68433 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hist1h3aP68433 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hist1h3aP68433 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hist1h3aP68433 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hist1h3aP68433 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hist1h3aP68433 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.12■□□□□ 0.65
Hist1h3aP68433 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hist1h3aP68433 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Hist1h3aP68433 Gm11175-201ENSMUST00000116172 543 ntBASIC19.12■□□□□ 0.65
Hist1h3aP68433 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms