Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Crnkl1P63154 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.77■■□□□ 1.08
Crnkl1P63154 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Crnkl1P63154 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Crnkl1P63154 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Crnkl1P63154 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
Crnkl1P63154 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Crnkl1P63154 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.76■■□□□ 1.07
Crnkl1P63154 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Crnkl1P63154 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Crnkl1P63154 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Crnkl1P63154 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Crnkl1P63154 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Crnkl1P63154 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.75■■□□□ 1.07
Crnkl1P63154 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
Crnkl1P63154 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.75■■□□□ 1.07
Crnkl1P63154 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Crnkl1P63154 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Crnkl1P63154 Gm8503-201ENSMUST00000118131 455 ntBASIC21.74■■□□□ 1.07
Crnkl1P63154 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.74■■□□□ 1.07
Crnkl1P63154 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Crnkl1P63154 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.74■■□□□ 1.07
Crnkl1P63154 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Crnkl1P63154 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Crnkl1P63154 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
Crnkl1P63154 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Crnkl1P63154 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Crnkl1P63154 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Crnkl1P63154 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Crnkl1P63154 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Crnkl1P63154 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Crnkl1P63154 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.71■■□□□ 1.07
Crnkl1P63154 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Crnkl1P63154 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Crnkl1P63154 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Crnkl1P63154 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.7■■□□□ 1.07
Crnkl1P63154 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Crnkl1P63154 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Crnkl1P63154 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Crnkl1P63154 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Crnkl1P63154 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Crnkl1P63154 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Crnkl1P63154 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.7■■□□□ 1.06
Crnkl1P63154 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
Crnkl1P63154 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Crnkl1P63154 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Crnkl1P63154 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Crnkl1P63154 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Crnkl1P63154 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Crnkl1P63154 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Crnkl1P63154 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Crnkl1P63154 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Crnkl1P63154 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Crnkl1P63154 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Crnkl1P63154 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Crnkl1P63154 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Crnkl1P63154 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Crnkl1P63154 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Crnkl1P63154 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Crnkl1P63154 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Crnkl1P63154 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Crnkl1P63154 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Crnkl1P63154 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Crnkl1P63154 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Crnkl1P63154 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
Crnkl1P63154 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Crnkl1P63154 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Crnkl1P63154 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Crnkl1P63154 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.65■■□□□ 1.06
Crnkl1P63154 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.65■■□□□ 1.06
Crnkl1P63154 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Crnkl1P63154 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Crnkl1P63154 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Crnkl1P63154 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
Crnkl1P63154 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.64■■□□□ 1.05
Crnkl1P63154 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.64■■□□□ 1.05
Crnkl1P63154 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Crnkl1P63154 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Crnkl1P63154 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Crnkl1P63154 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Crnkl1P63154 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Crnkl1P63154 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Crnkl1P63154 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Crnkl1P63154 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Crnkl1P63154 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Crnkl1P63154 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Crnkl1P63154 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Crnkl1P63154 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.63■■□□□ 1.05
Crnkl1P63154 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Crnkl1P63154 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.62■■□□□ 1.05
Crnkl1P63154 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
Crnkl1P63154 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Crnkl1P63154 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Crnkl1P63154 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
Crnkl1P63154 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Crnkl1P63154 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.61■■□□□ 1.05
Crnkl1P63154 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Crnkl1P63154 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Crnkl1P63154 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Crnkl1P63154 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms