Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Rab4aP56371 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rab4aP56371 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab4aP56371 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab4aP56371 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab4aP56371 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab4aP56371 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab4aP56371 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.37■□□□□ 0.37
Rab4aP56371 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab4aP56371 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab4aP56371 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rab4aP56371 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab4aP56371 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab4aP56371 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rab4aP56371 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rab4aP56371 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rab4aP56371 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rab4aP56371 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rab4aP56371 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Rab4aP56371 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rab4aP56371 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Rab4aP56371 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Rab4aP56371 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rab4aP56371 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rab4aP56371 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Rab4aP56371 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rab4aP56371 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rab4aP56371 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rab4aP56371 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.33■□□□□ 0.37
Rab4aP56371 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Rab4aP56371 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Rab4aP56371 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.33■□□□□ 0.37
Rab4aP56371 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rab4aP56371 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rab4aP56371 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rab4aP56371 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.33■□□□□ 0.36
Rab4aP56371 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rab4aP56371 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab4aP56371 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rab4aP56371 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab4aP56371 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rab4aP56371 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rab4aP56371 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab4aP56371 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Rab4aP56371 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab4aP56371 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab4aP56371 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
Rab4aP56371 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rab4aP56371 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab4aP56371 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab4aP56371 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab4aP56371 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab4aP56371 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab4aP56371 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rab4aP56371 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab4aP56371 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Rab4aP56371 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rab4aP56371 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab4aP56371 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab4aP56371 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.3■□□□□ 0.36
Rab4aP56371 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab4aP56371 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab4aP56371 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
Rab4aP56371 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab4aP56371 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab4aP56371 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab4aP56371 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.29■□□□□ 0.36
Rab4aP56371 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab4aP56371 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Rab4aP56371 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC17.28■□□□□ 0.36
Rab4aP56371 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Rab4aP56371 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab4aP56371 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab4aP56371 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Rab4aP56371 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab4aP56371 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Rab4aP56371 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab4aP56371 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab4aP56371 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab4aP56371 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rab4aP56371 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rab4aP56371 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Rab4aP56371 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rab4aP56371 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rab4aP56371 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.26■□□□□ 0.35
Rab4aP56371 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rab4aP56371 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rab4aP56371 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rab4aP56371 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rab4aP56371 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rab4aP56371 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Rab4aP56371 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rab4aP56371 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rab4aP56371 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rab4aP56371 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rab4aP56371 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rab4aP56371 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rab4aP56371 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rab4aP56371 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Rab4aP56371 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms