Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC23.16■■□□□ 1.3
Sox1P53783 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC23.16■■□□□ 1.3
Sox1P53783 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Sox1P53783 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Sox1P53783 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC23.15■■□□□ 1.3
Sox1P53783 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC23.15■■□□□ 1.3
Sox1P53783 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Sox1P53783 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Sox1P53783 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Sox1P53783 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Sox1P53783 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Sox1P53783 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.14■■□□□ 1.29
Sox1P53783 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Sox1P53783 AC164629.5-201ENSMUST00000220387 632 ntBASIC23.14■■□□□ 1.29
Sox1P53783 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Sox1P53783 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Sox1P53783 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Sox1P53783 Gm16464-201ENSMUST00000117815 1095 ntBASIC23.13■■□□□ 1.29
Sox1P53783 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Sox1P53783 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Sox1P53783 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Sox1P53783 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC23.12■■□□□ 1.29
Sox1P53783 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Sox1P53783 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Sox1P53783 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.12■■□□□ 1.29
Sox1P53783 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Sox1P53783 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Sox1P53783 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
Sox1P53783 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC23.11■■□□□ 1.29
Sox1P53783 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
Sox1P53783 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.1■■□□□ 1.29
Sox1P53783 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
Sox1P53783 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Sox1P53783 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.1■■□□□ 1.29
Sox1P53783 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Sox1P53783 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Sox1P53783 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Sox1P53783 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Sox1P53783 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC23.09■■□□□ 1.29
Sox1P53783 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
Sox1P53783 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Sox1P53783 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC23.08■■□□□ 1.29
Sox1P53783 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC23.08■■□□□ 1.29
Sox1P53783 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC23.08■■□□□ 1.29
Sox1P53783 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Sox1P53783 AC116713.1-201ENSMUST00000215074 430 ntBASIC23.08■■□□□ 1.29
Sox1P53783 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Sox1P53783 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.28
Sox1P53783 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Sox1P53783 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Sox1P53783 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC23.07■■□□□ 1.28
Sox1P53783 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Sox1P53783 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Sox1P53783 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC23.07■■□□□ 1.28
Sox1P53783 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Sox1P53783 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Sox1P53783 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Sox1P53783 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Sox1P53783 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.05■■□□□ 1.28
Sox1P53783 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC23.05■■□□□ 1.28
Sox1P53783 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Sox1P53783 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC23.05■■□□□ 1.28
Sox1P53783 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC23.04■■□□□ 1.28
Sox1P53783 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Sox1P53783 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.02■■□□□ 1.28
Sox1P53783 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC23.02■■□□□ 1.28
Sox1P53783 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Sox1P53783 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC23.02■■□□□ 1.28
Sox1P53783 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Sox1P53783 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
Sox1P53783 AC112142.1-201ENSMUST00000228796 918 ntBASIC23.01■■□□□ 1.27
Sox1P53783 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Sox1P53783 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Sox1P53783 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Sox1P53783 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
Sox1P53783 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Sox1P53783 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC23■■□□□ 1.27
Sox1P53783 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23■■□□□ 1.27
Sox1P53783 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Sox1P53783 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Sox1P53783 Gm40881-201ENSMUST00000223397 166 ntBASIC22.99■■□□□ 1.27
Sox1P53783 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC22.98■■□□□ 1.27
Sox1P53783 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Sox1P53783 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Sox1P53783 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Sox1P53783 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Sox1P53783 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Sox1P53783 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Sox1P53783 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Sox1P53783 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC22.97■■□□□ 1.27
Sox1P53783 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Sox1P53783 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC22.96■■□□□ 1.27
Sox1P53783 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
Sox1P53783 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC22.96■■□□□ 1.27
Sox1P53783 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Sox1P53783 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Sox1P53783 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Sox1P53783 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Sox1P53783 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Sox1P53783 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms