Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sox18P43680 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.32■■□□□ 1
Sox18P43680 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.32■■□□□ 1
Sox18P43680 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.32■■□□□ 1
Sox18P43680 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.31■■□□□ 1
Sox18P43680 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.31■■□□□ 1
Sox18P43680 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.31■■□□□ 1
Sox18P43680 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Sox18P43680 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sox18P43680 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Sox18P43680 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.3■■□□□ 1
Sox18P43680 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.3■■□□□ 1
Sox18P43680 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sox18P43680 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.29■■□□□ 1
Sox18P43680 Gm9847-201ENSMUST00000052528 599 ntBASIC21.29■■□□□ 1
Sox18P43680 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.29■■□□□ 1
Sox18P43680 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sox18P43680 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sox18P43680 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.28■■□□□ 1
Sox18P43680 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Sox18P43680 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Sox18P43680 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sox18P43680 Gm7417-201ENSMUST00000192950 473 ntBASIC21.28■■□□□ 1
Sox18P43680 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.28■■□□□ 1
Sox18P43680 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sox18P43680 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sox18P43680 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Sox18P43680 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC21.27■■□□□ 1
Sox18P43680 Gm21956-201ENSMUST00000179946 522 ntBASIC21.27■■□□□ 1
Sox18P43680 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
Sox18P43680 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Sox18P43680 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.26■□□□□ 0.99
Sox18P43680 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Sox18P43680 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sox18P43680 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.26■□□□□ 0.99
Sox18P43680 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.26■□□□□ 0.99
Sox18P43680 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sox18P43680 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Sox18P43680 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Sox18P43680 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.25■□□□□ 0.99
Sox18P43680 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Sox18P43680 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Sox18P43680 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sox18P43680 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sox18P43680 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sox18P43680 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sox18P43680 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Sox18P43680 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.25■□□□□ 0.99
Sox18P43680 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Sox18P43680 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sox18P43680 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sox18P43680 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sox18P43680 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sox18P43680 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sox18P43680 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sox18P43680 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Sox18P43680 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Sox18P43680 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sox18P43680 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sox18P43680 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sox18P43680 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.2■□□□□ 0.98
Sox18P43680 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.2■□□□□ 0.98
Sox18P43680 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sox18P43680 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sox18P43680 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sox18P43680 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sox18P43680 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sox18P43680 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sox18P43680 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sox18P43680 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Sox18P43680 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sox18P43680 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Sox18P43680 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sox18P43680 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.19■□□□□ 0.98
Sox18P43680 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sox18P43680 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.18■□□□□ 0.98
Sox18P43680 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sox18P43680 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sox18P43680 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.18■□□□□ 0.98
Sox18P43680 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sox18P43680 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.17■□□□□ 0.98
Sox18P43680 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Sox18P43680 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Sox18P43680 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Sox18P43680 Slc35b2-207ENSMUST00000226086 850 ntBASIC21.16■□□□□ 0.98
Sox18P43680 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sox18P43680 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Sox18P43680 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Sox18P43680 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Sox18P43680 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.15■□□□□ 0.98
Sox18P43680 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sox18P43680 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sox18P43680 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sox18P43680 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Sox18P43680 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sox18P43680 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.14■□□□□ 0.97
Sox18P43680 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sox18P43680 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sox18P43680 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Sox18P43680 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms