Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Slc6a1P31648 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc6a1P31648 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Slc6a1P31648 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Slc6a1P31648 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc6a1P31648 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc6a1P31648 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc6a1P31648 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc6a1P31648 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Slc6a1P31648 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc6a1P31648 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc6a1P31648 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc6a1P31648 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc6a1P31648 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc6a1P31648 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc6a1P31648 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Slc6a1P31648 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Slc6a1P31648 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc6a1P31648 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Slc6a1P31648 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a1P31648 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a1P31648 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a1P31648 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a1P31648 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Slc6a1P31648 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slc6a1P31648 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slc6a1P31648 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slc6a1P31648 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Slc6a1P31648 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Slc6a1P31648 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.9■□□□□ 0.62
Slc6a1P31648 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.89■□□□□ 0.62
Slc6a1P31648 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Slc6a1P31648 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Slc6a1P31648 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.89■□□□□ 0.61
Slc6a1P31648 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a1P31648 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a1P31648 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Slc6a1P31648 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a1P31648 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a1P31648 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a1P31648 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a1P31648 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Slc6a1P31648 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc6a1P31648 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc6a1P31648 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc6a1P31648 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Slc6a1P31648 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc6a1P31648 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc6a1P31648 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc6a1P31648 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc6a1P31648 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.86■□□□□ 0.61
Slc6a1P31648 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc6a1P31648 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc6a1P31648 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc6a1P31648 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a1P31648 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a1P31648 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a1P31648 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.85■□□□□ 0.61
Slc6a1P31648 Nkain2-201ENSMUST00000092602 558 ntBASIC18.85■□□□□ 0.61
Slc6a1P31648 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a1P31648 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Slc6a1P31648 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a1P31648 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Slc6a1P31648 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.84■□□□□ 0.61
Slc6a1P31648 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a1P31648 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a1P31648 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a1P31648 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a1P31648 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Slc6a1P31648 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a1P31648 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.84■□□□□ 0.61
Slc6a1P31648 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.84■□□□□ 0.61
Slc6a1P31648 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Slc6a1P31648 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a1P31648 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a1P31648 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Slc6a1P31648 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slc6a1P31648 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Slc6a1P31648 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slc6a1P31648 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.83■□□□□ 0.6
Slc6a1P31648 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.82■□□□□ 0.6
Slc6a1P31648 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc6a1P31648 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc6a1P31648 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc6a1P31648 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc6a1P31648 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Slc6a1P31648 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc6a1P31648 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc6a1P31648 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Slc6a1P31648 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Slc6a1P31648 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.81■□□□□ 0.6
Slc6a1P31648 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc6a1P31648 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc6a1P31648 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc6a1P31648 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc6a1P31648 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.8■□□□□ 0.6
Slc6a1P31648 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc6a1P31648 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Slc6a1P31648 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc6a1P31648 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms