Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.03■■□□□ 1.12
Nckap1P28660 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Nckap1P28660 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Nckap1P28660 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
Nckap1P28660 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Nckap1P28660 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Nckap1P28660 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Nckap1P28660 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Nckap1P28660 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Nckap1P28660 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Nckap1P28660 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Nckap1P28660 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC22■■□□□ 1.11
Nckap1P28660 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC22■■□□□ 1.11
Nckap1P28660 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC22■■□□□ 1.11
Nckap1P28660 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Nckap1P28660 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Nckap1P28660 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Nckap1P28660 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.99■■□□□ 1.11
Nckap1P28660 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Nckap1P28660 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Nckap1P28660 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Nckap1P28660 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Nckap1P28660 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Nckap1P28660 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Nckap1P28660 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Nckap1P28660 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.98■■□□□ 1.11
Nckap1P28660 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.98■■□□□ 1.11
Nckap1P28660 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Nckap1P28660 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Nckap1P28660 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Nckap1P28660 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Nckap1P28660 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Nckap1P28660 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Nckap1P28660 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.97■■□□□ 1.11
Nckap1P28660 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Nckap1P28660 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Nckap1P28660 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Nckap1P28660 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Nckap1P28660 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.96■■□□□ 1.11
Nckap1P28660 Gm22567-201ENSMUST00000175542 342 ntBASIC21.96■■□□□ 1.11
Nckap1P28660 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
Nckap1P28660 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Nckap1P28660 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Nckap1P28660 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Nckap1P28660 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Nckap1P28660 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Nckap1P28660 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Nckap1P28660 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Nckap1P28660 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Nckap1P28660 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Nckap1P28660 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.94■■□□□ 1.1
Nckap1P28660 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Nckap1P28660 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Nckap1P28660 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Nckap1P28660 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Nckap1P28660 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Nckap1P28660 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Nckap1P28660 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.93■■□□□ 1.1
Nckap1P28660 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Nckap1P28660 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Nckap1P28660 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Nckap1P28660 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Nckap1P28660 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Nckap1P28660 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nckap1P28660 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nckap1P28660 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nckap1P28660 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.91■■□□□ 1.1
Nckap1P28660 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.91■■□□□ 1.1
Nckap1P28660 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nckap1P28660 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nckap1P28660 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Nckap1P28660 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Nckap1P28660 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nckap1P28660 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nckap1P28660 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nckap1P28660 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Nckap1P28660 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Nckap1P28660 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Nckap1P28660 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.89■■□□□ 1.09
Nckap1P28660 Rps24-207ENSMUST00000224568 714 ntBASIC21.89■■□□□ 1.09
Nckap1P28660 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Nckap1P28660 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Nckap1P28660 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nckap1P28660 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Nckap1P28660 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.88■■□□□ 1.09
Nckap1P28660 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Nckap1P28660 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nckap1P28660 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nckap1P28660 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nckap1P28660 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Nckap1P28660 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
Nckap1P28660 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Nckap1P28660 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nckap1P28660 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nckap1P28660 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Nckap1P28660 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.86■■□□□ 1.09
Nckap1P28660 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.86■■□□□ 1.09
Nckap1P28660 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Nckap1P28660 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.85■■□□□ 1.09
Nckap1P28660 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms