Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.14■□□□□ 0.33
Ccl6P27784 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccl6P27784 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccl6P27784 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC17.13■□□□□ 0.33
Ccl6P27784 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccl6P27784 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccl6P27784 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccl6P27784 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Ccl6P27784 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ccl6P27784 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccl6P27784 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Ccl6P27784 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccl6P27784 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.12■□□□□ 0.33
Ccl6P27784 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Ccl6P27784 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccl6P27784 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccl6P27784 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccl6P27784 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Ccl6P27784 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccl6P27784 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Ccl6P27784 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccl6P27784 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ccl6P27784 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccl6P27784 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccl6P27784 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC17.1■□□□□ 0.33
Ccl6P27784 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccl6P27784 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccl6P27784 Gm9806-201ENSMUST00000051080 552 ntBASIC17.09■□□□□ 0.33
Ccl6P27784 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccl6P27784 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccl6P27784 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.08■□□□□ 0.32
Ccl6P27784 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ccl6P27784 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccl6P27784 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccl6P27784 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ccl6P27784 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccl6P27784 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ccl6P27784 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccl6P27784 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccl6P27784 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.06■□□□□ 0.32
Ccl6P27784 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccl6P27784 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Ccl6P27784 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccl6P27784 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccl6P27784 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccl6P27784 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ccl6P27784 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccl6P27784 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Ccl6P27784 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccl6P27784 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccl6P27784 Gm11687-201ENSMUST00000118911 886 ntBASIC17.05■□□□□ 0.32
Ccl6P27784 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ccl6P27784 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccl6P27784 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccl6P27784 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.05■□□□□ 0.32
Ccl6P27784 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccl6P27784 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ccl6P27784 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Ccl6P27784 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccl6P27784 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccl6P27784 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Ccl6P27784 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccl6P27784 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccl6P27784 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccl6P27784 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ccl6P27784 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ccl6P27784 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccl6P27784 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccl6P27784 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.03■□□□□ 0.32
Ccl6P27784 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccl6P27784 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ccl6P27784 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccl6P27784 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
Ccl6P27784 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ccl6P27784 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ccl6P27784 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccl6P27784 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.03■□□□□ 0.32
Ccl6P27784 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccl6P27784 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccl6P27784 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Ccl6P27784 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ccl6P27784 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccl6P27784 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
Ccl6P27784 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ccl6P27784 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccl6P27784 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ccl6P27784 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccl6P27784 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.01■□□□□ 0.31
Ccl6P27784 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccl6P27784 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccl6P27784 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccl6P27784 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Ccl6P27784 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ccl6P27784 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccl6P27784 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.01■□□□□ 0.31
Ccl6P27784 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccl6P27784 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccl6P27784 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccl6P27784 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ccl6P27784 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms