Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smim1P0C8K7 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smim1P0C8K7 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smim1P0C8K7 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Smim1P0C8K7 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Smim1P0C8K7 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
Smim1P0C8K7 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smim1P0C8K7 AC153962.1-201ENSMUST00000218530 1948 ntBASIC15.33■□□□□ 0.05
Smim1P0C8K7 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Smim1P0C8K7 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smim1P0C8K7 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smim1P0C8K7 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smim1P0C8K7 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smim1P0C8K7 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smim1P0C8K7 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smim1P0C8K7 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Smim1P0C8K7 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
Smim1P0C8K7 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smim1P0C8K7 AC124392.1-201ENSMUST00000225172 5324 ntBASIC15.32■□□□□ 0.04
Smim1P0C8K7 Gm15043-201ENSMUST00000118843 1543 ntBASIC15.32■□□□□ 0.04
Smim1P0C8K7 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smim1P0C8K7 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smim1P0C8K7 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smim1P0C8K7 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smim1P0C8K7 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smim1P0C8K7 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smim1P0C8K7 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smim1P0C8K7 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Smim1P0C8K7 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smim1P0C8K7 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim1P0C8K7 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Smim1P0C8K7 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim1P0C8K7 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim1P0C8K7 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim1P0C8K7 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim1P0C8K7 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Smim1P0C8K7 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim1P0C8K7 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim1P0C8K7 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim1P0C8K7 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim1P0C8K7 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim1P0C8K7 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim1P0C8K7 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smim1P0C8K7 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim1P0C8K7 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Smim1P0C8K7 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim1P0C8K7 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Smim1P0C8K7 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smim1P0C8K7 Gm9910-201ENSMUST00000195385 1550 ntBASIC15.28■□□□□ 0.04
Smim1P0C8K7 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smim1P0C8K7 Iqck-206ENSMUST00000208658 2891 ntBASIC15.28■□□□□ 0.04
Smim1P0C8K7 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smim1P0C8K7 Gm27322-201ENSMUST00000184007 104 ntBASIC15.28■□□□□ 0.04
Smim1P0C8K7 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smim1P0C8K7 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smim1P0C8K7 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Smim1P0C8K7 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smim1P0C8K7 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smim1P0C8K7 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Smim1P0C8K7 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smim1P0C8K7 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smim1P0C8K7 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC15.27■□□□□ 0.04
Smim1P0C8K7 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC15.27■□□□□ 0.04
Smim1P0C8K7 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Smim1P0C8K7 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smim1P0C8K7 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smim1P0C8K7 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC15.27■□□□□ 0.03
Smim1P0C8K7 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Smim1P0C8K7 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC15.27■□□□□ 0.03
Smim1P0C8K7 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Smim1P0C8K7 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC15.27■□□□□ 0.03
Smim1P0C8K7 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC15.27■□□□□ 0.03
Smim1P0C8K7 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Smim1P0C8K7 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smim1P0C8K7 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smim1P0C8K7 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smim1P0C8K7 Gm4430-201ENSMUST00000192413 1943 ntBASIC15.26■□□□□ 0.03
Smim1P0C8K7 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC15.26■□□□□ 0.03
Smim1P0C8K7 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Smim1P0C8K7 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
Smim1P0C8K7 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smim1P0C8K7 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smim1P0C8K7 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smim1P0C8K7 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smim1P0C8K7 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Smim1P0C8K7 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smim1P0C8K7 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smim1P0C8K7 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smim1P0C8K7 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smim1P0C8K7 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smim1P0C8K7 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Smim1P0C8K7 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smim1P0C8K7 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smim1P0C8K7 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smim1P0C8K7 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smim1P0C8K7 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Smim1P0C8K7 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smim1P0C8K7 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smim1P0C8K7 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smim1P0C8K7 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms