Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ifna1P01572 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ifna1P01572 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ifna1P01572 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ifna1P01572 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Ifna1P01572 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ifna1P01572 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ifna1P01572 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ifna1P01572 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ifna1P01572 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ifna1P01572 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ifna1P01572 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.57■□□□□ 0.56
Ifna1P01572 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.57■□□□□ 0.56
Ifna1P01572 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.57■□□□□ 0.56
Ifna1P01572 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ifna1P01572 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ifna1P01572 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.57■□□□□ 0.56
Ifna1P01572 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Ifna1P01572 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Ifna1P01572 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ifna1P01572 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ifna1P01572 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.56■□□□□ 0.56
Ifna1P01572 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.56■□□□□ 0.56
Ifna1P01572 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ifna1P01572 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.56■□□□□ 0.56
Ifna1P01572 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.56■□□□□ 0.56
Ifna1P01572 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ifna1P01572 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Ifna1P01572 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.55■□□□□ 0.56
Ifna1P01572 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ifna1P01572 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.55■□□□□ 0.56
Ifna1P01572 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ifna1P01572 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ifna1P01572 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ifna1P01572 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ifna1P01572 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ifna1P01572 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Ifna1P01572 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.54■□□□□ 0.56
Ifna1P01572 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ifna1P01572 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ifna1P01572 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ifna1P01572 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ifna1P01572 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.54■□□□□ 0.56
Ifna1P01572 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ifna1P01572 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ifna1P01572 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.53■□□□□ 0.56
Ifna1P01572 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ifna1P01572 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ifna1P01572 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ifna1P01572 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ifna1P01572 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.52■□□□□ 0.56
Ifna1P01572 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Ifna1P01572 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.52■□□□□ 0.56
Ifna1P01572 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ifna1P01572 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ifna1P01572 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Ifna1P01572 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ifna1P01572 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ifna1P01572 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ifna1P01572 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ifna1P01572 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Ifna1P01572 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ifna1P01572 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.5■□□□□ 0.55
Ifna1P01572 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.5■□□□□ 0.55
Ifna1P01572 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Ifna1P01572 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ifna1P01572 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.49■□□□□ 0.55
Ifna1P01572 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ifna1P01572 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Ifna1P01572 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ifna1P01572 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ifna1P01572 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Ifna1P01572 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.48■□□□□ 0.55
Ifna1P01572 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Ifna1P01572 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Ifna1P01572 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ifna1P01572 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ifna1P01572 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ifna1P01572 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ifna1P01572 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ifna1P01572 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.47■□□□□ 0.55
Ifna1P01572 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ifna1P01572 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ifna1P01572 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ifna1P01572 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ifna1P01572 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ifna1P01572 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ifna1P01572 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ifna1P01572 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.46■□□□□ 0.55
Ifna1P01572 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Ifna1P01572 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ifna1P01572 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.45■□□□□ 0.54
Ifna1P01572 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ifna1P01572 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ifna1P01572 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ifna1P01572 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ifna1P01572 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.44■□□□□ 0.54
Ifna1P01572 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ifna1P01572 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ifna1P01572 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms