Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.1■■□□□ 1.29
Syn1O88935 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Syn1O88935 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Syn1O88935 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Syn1O88935 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Syn1O88935 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Syn1O88935 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Syn1O88935 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Syn1O88935 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.08■■□□□ 1.29
Syn1O88935 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Syn1O88935 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC23.07■■□□□ 1.28
Syn1O88935 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Syn1O88935 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Syn1O88935 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Syn1O88935 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Syn1O88935 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.04■■□□□ 1.28
Syn1O88935 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Syn1O88935 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Syn1O88935 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC23.04■■□□□ 1.28
Syn1O88935 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Syn1O88935 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Syn1O88935 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Syn1O88935 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Syn1O88935 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Syn1O88935 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Syn1O88935 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Syn1O88935 Appbp2os-202ENSMUST00000206972 447 ntBASIC23.03■■□□□ 1.28
Syn1O88935 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Syn1O88935 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Syn1O88935 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Syn1O88935 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Syn1O88935 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Syn1O88935 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Syn1O88935 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Syn1O88935 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Syn1O88935 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC23.01■■□□□ 1.27
Syn1O88935 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Syn1O88935 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC23■■□□□ 1.27
Syn1O88935 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Syn1O88935 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Syn1O88935 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC23■■□□□ 1.27
Syn1O88935 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Syn1O88935 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Syn1O88935 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Syn1O88935 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.98■■□□□ 1.27
Syn1O88935 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC22.98■■□□□ 1.27
Syn1O88935 AC140930.3-201ENSMUST00000222935 274 ntBASIC22.98■■□□□ 1.27
Syn1O88935 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.97■■□□□ 1.27
Syn1O88935 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Syn1O88935 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.97■■□□□ 1.27
Syn1O88935 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC22.97■■□□□ 1.27
Syn1O88935 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
Syn1O88935 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Syn1O88935 Gm22238-201ENSMUST00000175222 88 ntBASIC22.96■■□□□ 1.27
Syn1O88935 Flvcr1-202ENSMUST00000191946 1216 ntBASIC22.96■■□□□ 1.27
Syn1O88935 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC22.96■■□□□ 1.27
Syn1O88935 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Syn1O88935 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
Syn1O88935 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
Syn1O88935 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Syn1O88935 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.94■■□□□ 1.26
Syn1O88935 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Syn1O88935 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Syn1O88935 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC22.94■■□□□ 1.26
Syn1O88935 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Syn1O88935 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Syn1O88935 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Syn1O88935 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Syn1O88935 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.92■■□□□ 1.26
Syn1O88935 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Syn1O88935 Gm12821-201ENSMUST00000120022 600 ntBASIC22.92■■□□□ 1.26
Syn1O88935 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC22.92■■□□□ 1.26
Syn1O88935 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Syn1O88935 Gm16464-201ENSMUST00000117815 1095 ntBASIC22.91■■□□□ 1.26
Syn1O88935 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Syn1O88935 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Syn1O88935 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Syn1O88935 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Syn1O88935 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Syn1O88935 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Syn1O88935 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Syn1O88935 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Syn1O88935 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Syn1O88935 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Syn1O88935 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Syn1O88935 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Syn1O88935 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Syn1O88935 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Syn1O88935 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Syn1O88935 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.89■■□□□ 1.25
Syn1O88935 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Syn1O88935 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Syn1O88935 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC22.89■■□□□ 1.25
Syn1O88935 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC22.88■■□□□ 1.25
Syn1O88935 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC22.88■■□□□ 1.25
Syn1O88935 Gm27454-201ENSMUST00000185090 204 ntBASIC22.88■■□□□ 1.25
Syn1O88935 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
Syn1O88935 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Syn1O88935 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Syn1O88935 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 147.3 ms