Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac3O88895 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac3O88895 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hdac3O88895 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
Hdac3O88895 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hdac3O88895 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hdac3O88895 Gm45364-201ENSMUST00000210883 159 ntBASIC19.61■□□□□ 0.73
Hdac3O88895 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hdac3O88895 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hdac3O88895 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Hdac3O88895 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Hdac3O88895 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
Hdac3O88895 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hdac3O88895 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hdac3O88895 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Hdac3O88895 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hdac3O88895 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hdac3O88895 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Hdac3O88895 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.59■□□□□ 0.73
Hdac3O88895 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hdac3O88895 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hdac3O88895 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hdac3O88895 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hdac3O88895 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.59■□□□□ 0.73
Hdac3O88895 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.59■□□□□ 0.73
Hdac3O88895 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
Hdac3O88895 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hdac3O88895 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Hdac3O88895 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.58■□□□□ 0.72
Hdac3O88895 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Hdac3O88895 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hdac3O88895 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Hdac3O88895 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Hdac3O88895 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.57■□□□□ 0.72
Hdac3O88895 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.57■□□□□ 0.72
Hdac3O88895 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hdac3O88895 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hdac3O88895 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hdac3O88895 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hdac3O88895 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.56■□□□□ 0.72
Hdac3O88895 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hdac3O88895 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Hdac3O88895 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.56■□□□□ 0.72
Hdac3O88895 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hdac3O88895 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hdac3O88895 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hdac3O88895 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Hdac3O88895 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.55■□□□□ 0.72
Hdac3O88895 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hdac3O88895 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hdac3O88895 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hdac3O88895 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hdac3O88895 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hdac3O88895 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hdac3O88895 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hdac3O88895 Gm6311-201ENSMUST00000073790 878 ntBASIC19.53■□□□□ 0.72
Hdac3O88895 Terc-201ENSMUST00000082862 423 ntBASIC19.53■□□□□ 0.72
Hdac3O88895 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.52■□□□□ 0.72
Hdac3O88895 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Hdac3O88895 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hdac3O88895 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Hdac3O88895 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hdac3O88895 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hdac3O88895 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hdac3O88895 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Hdac3O88895 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hdac3O88895 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hdac3O88895 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hdac3O88895 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hdac3O88895 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hdac3O88895 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hdac3O88895 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Hdac3O88895 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.5■□□□□ 0.71
Hdac3O88895 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Hdac3O88895 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.5■□□□□ 0.71
Hdac3O88895 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hdac3O88895 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hdac3O88895 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.49■□□□□ 0.71
Hdac3O88895 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Hdac3O88895 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hdac3O88895 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Hdac3O88895 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hdac3O88895 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hdac3O88895 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hdac3O88895 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hdac3O88895 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.48■□□□□ 0.71
Hdac3O88895 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Hdac3O88895 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hdac3O88895 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hdac3O88895 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Hdac3O88895 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Hdac3O88895 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hdac3O88895 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.47■□□□□ 0.71
Hdac3O88895 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hdac3O88895 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.47■□□□□ 0.71
Hdac3O88895 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Hdac3O88895 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.47■□□□□ 0.71
Hdac3O88895 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hdac3O88895 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hdac3O88895 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms