Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sh2d1aO88890 Gm9812-201ENSMUST00000061934 968 ntBASIC15.51■□□□□ 0.07
Sh2d1aO88890 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sh2d1aO88890 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh2d1aO88890 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Sh2d1aO88890 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh2d1aO88890 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Sh2d1aO88890 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh2d1aO88890 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Sh2d1aO88890 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sh2d1aO88890 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Sh2d1aO88890 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Sh2d1aO88890 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sh2d1aO88890 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Sh2d1aO88890 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC15.5■□□□□ 0.07
Sh2d1aO88890 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Sh2d1aO88890 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Sh2d1aO88890 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh2d1aO88890 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC15.49■□□□□ 0.07
Sh2d1aO88890 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC15.49■□□□□ 0.07
Sh2d1aO88890 Gm6311-201ENSMUST00000073790 878 ntBASIC15.49■□□□□ 0.07
Sh2d1aO88890 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC15.49■□□□□ 0.07
Sh2d1aO88890 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Sh2d1aO88890 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sh2d1aO88890 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Sh2d1aO88890 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC15.49■□□□□ 0.07
Sh2d1aO88890 AC164433.2-201ENSMUST00000226346 1701 ntBASIC15.48■□□□□ 0.07
Sh2d1aO88890 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC15.48■□□□□ 0.07
Sh2d1aO88890 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh2d1aO88890 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC15.48■□□□□ 0.07
Sh2d1aO88890 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Sh2d1aO88890 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh2d1aO88890 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Sh2d1aO88890 Pkd1-207ENSMUST00000228550 1050 ntBASIC15.48■□□□□ 0.07
Sh2d1aO88890 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh2d1aO88890 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Sh2d1aO88890 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Sh2d1aO88890 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh2d1aO88890 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh2d1aO88890 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh2d1aO88890 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh2d1aO88890 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sh2d1aO88890 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sh2d1aO88890 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC15.46■□□□□ 0.07
Sh2d1aO88890 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Sh2d1aO88890 AC153911.1-201ENSMUST00000220378 758 ntBASIC15.46■□□□□ 0.07
Sh2d1aO88890 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Sh2d1aO88890 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC15.46■□□□□ 0.07
Sh2d1aO88890 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Sh2d1aO88890 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh2d1aO88890 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Sh2d1aO88890 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Sh2d1aO88890 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh2d1aO88890 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Sh2d1aO88890 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC15.45■□□□□ 0.06
Sh2d1aO88890 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh2d1aO88890 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Sh2d1aO88890 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sh2d1aO88890 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
Sh2d1aO88890 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Sh2d1aO88890 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC15.44■□□□□ 0.06
Sh2d1aO88890 Terc-201ENSMUST00000082862 423 ntBASIC15.44■□□□□ 0.06
Sh2d1aO88890 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sh2d1aO88890 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
Sh2d1aO88890 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sh2d1aO88890 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh2d1aO88890 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sh2d1aO88890 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh2d1aO88890 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Sh2d1aO88890 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh2d1aO88890 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Sh2d1aO88890 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sh2d1aO88890 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh2d1aO88890 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sh2d1aO88890 AC124392.1-201ENSMUST00000225172 5324 ntBASIC15.42■□□□□ 0.06
Sh2d1aO88890 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh2d1aO88890 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Sh2d1aO88890 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh2d1aO88890 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sh2d1aO88890 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh2d1aO88890 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Sh2d1aO88890 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Sh2d1aO88890 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh2d1aO88890 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh2d1aO88890 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Sh2d1aO88890 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Sh2d1aO88890 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh2d1aO88890 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh2d1aO88890 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh2d1aO88890 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Sh2d1aO88890 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Sh2d1aO88890 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC15.41■□□□□ 0.06
Sh2d1aO88890 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Sh2d1aO88890 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh2d1aO88890 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC15.4■□□□□ 0.06
Sh2d1aO88890 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh2d1aO88890 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC15.4■□□□□ 0.06
Sh2d1aO88890 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh2d1aO88890 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Sh2d1aO88890 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms