Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Becn1O88597 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Becn1O88597 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC25.16■■□□□ 1.62
Becn1O88597 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Becn1O88597 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Becn1O88597 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
Becn1O88597 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Becn1O88597 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Becn1O88597 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Becn1O88597 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Becn1O88597 Gm9939-201ENSMUST00000067161 1154 ntBASIC25.15■■□□□ 1.62
Becn1O88597 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
Becn1O88597 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
Becn1O88597 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Becn1O88597 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Becn1O88597 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Becn1O88597 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Becn1O88597 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC25.13■■□□□ 1.61
Becn1O88597 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Becn1O88597 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC25.13■■□□□ 1.61
Becn1O88597 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Becn1O88597 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Becn1O88597 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC25.13■■□□□ 1.61
Becn1O88597 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Becn1O88597 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
Becn1O88597 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Becn1O88597 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
Becn1O88597 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
Becn1O88597 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
Becn1O88597 Particl-201ENSMUST00000205370 1560 ntBASIC25.12■■□□□ 1.61
Becn1O88597 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Becn1O88597 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC25.11■■□□□ 1.61
Becn1O88597 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
Becn1O88597 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC25.1■■□□□ 1.61
Becn1O88597 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
Becn1O88597 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Becn1O88597 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Becn1O88597 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Becn1O88597 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Becn1O88597 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
Becn1O88597 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Becn1O88597 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
Becn1O88597 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Becn1O88597 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
Becn1O88597 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
Becn1O88597 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Becn1O88597 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Becn1O88597 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.08■■□□□ 1.6
Becn1O88597 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
Becn1O88597 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
Becn1O88597 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Becn1O88597 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Becn1O88597 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Becn1O88597 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Becn1O88597 Gm32051-202ENSMUST00000197905 2385 ntBASIC25.07■■□□□ 1.6
Becn1O88597 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Becn1O88597 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
Becn1O88597 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
Becn1O88597 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
Becn1O88597 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC25.05■■□□□ 1.6
Becn1O88597 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Becn1O88597 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
Becn1O88597 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Becn1O88597 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Becn1O88597 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Becn1O88597 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
Becn1O88597 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Becn1O88597 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Becn1O88597 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
Becn1O88597 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Becn1O88597 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Becn1O88597 Gm6821-201ENSMUST00000107540 542 ntBASIC25.02■■□□□ 1.6
Becn1O88597 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC25.02■■□□□ 1.6
Becn1O88597 Gm42809-201ENSMUST00000198429 1138 ntBASIC25.02■■□□□ 1.6
Becn1O88597 Gm43006-201ENSMUST00000197702 1602 ntBASIC25.01■■□□□ 1.59
Becn1O88597 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Becn1O88597 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Becn1O88597 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Becn1O88597 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Becn1O88597 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Becn1O88597 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
Becn1O88597 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Becn1O88597 Nkain2-201ENSMUST00000092602 558 ntBASIC25■■□□□ 1.59
Becn1O88597 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
Becn1O88597 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Becn1O88597 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
Becn1O88597 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Becn1O88597 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Becn1O88597 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Becn1O88597 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC24.97■■□□□ 1.59
Becn1O88597 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Becn1O88597 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
Becn1O88597 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Becn1O88597 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Becn1O88597 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Becn1O88597 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Becn1O88597 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Becn1O88597 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC24.96■■□□□ 1.59
Becn1O88597 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Becn1O88597 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms