Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
Slc6a20bO88575 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Slc6a20bO88575 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Slc6a20bO88575 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
Slc6a20bO88575 Gm43034-201ENSMUST00000198678 1364 ntBASIC24.66■■□□□ 1.54
Slc6a20bO88575 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Slc6a20bO88575 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC24.65■■□□□ 1.54
Slc6a20bO88575 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Slc6a20bO88575 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
Slc6a20bO88575 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Slc6a20bO88575 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Slc6a20bO88575 Gm7417-201ENSMUST00000192950 473 ntBASIC24.64■■□□□ 1.54
Slc6a20bO88575 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Slc6a20bO88575 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Slc6a20bO88575 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Slc6a20bO88575 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC24.61■■□□□ 1.53
Slc6a20bO88575 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Slc6a20bO88575 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Slc6a20bO88575 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Slc6a20bO88575 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
Slc6a20bO88575 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Slc6a20bO88575 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.6■■□□□ 1.53
Slc6a20bO88575 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Slc6a20bO88575 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Slc6a20bO88575 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Slc6a20bO88575 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC24.59■■□□□ 1.53
Slc6a20bO88575 Gm21956-201ENSMUST00000179946 522 ntBASIC24.59■■□□□ 1.53
Slc6a20bO88575 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Slc6a20bO88575 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Slc6a20bO88575 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Slc6a20bO88575 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Slc6a20bO88575 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
Slc6a20bO88575 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Slc6a20bO88575 Gm16464-201ENSMUST00000117815 1095 ntBASIC24.57■■□□□ 1.52
Slc6a20bO88575 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Slc6a20bO88575 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Slc6a20bO88575 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Slc6a20bO88575 Amer2-203ENSMUST00000225247 2662 ntBASIC24.57■■□□□ 1.52
Slc6a20bO88575 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Slc6a20bO88575 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC24.56■■□□□ 1.52
Slc6a20bO88575 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC24.56■■□□□ 1.52
Slc6a20bO88575 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC24.56■■□□□ 1.52
Slc6a20bO88575 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC24.56■■□□□ 1.52
Slc6a20bO88575 Gm9847-201ENSMUST00000052528 599 ntBASIC24.56■■□□□ 1.52
Slc6a20bO88575 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
Slc6a20bO88575 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Slc6a20bO88575 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Slc6a20bO88575 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Slc6a20bO88575 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC24.54■■□□□ 1.52
Slc6a20bO88575 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC24.53■■□□□ 1.52
Slc6a20bO88575 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC24.53■■□□□ 1.52
Slc6a20bO88575 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Slc6a20bO88575 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Slc6a20bO88575 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Slc6a20bO88575 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Slc6a20bO88575 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Slc6a20bO88575 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Slc6a20bO88575 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Slc6a20bO88575 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Slc6a20bO88575 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
Slc6a20bO88575 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Slc6a20bO88575 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
Slc6a20bO88575 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC24.51■■□□□ 1.51
Slc6a20bO88575 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC24.51■■□□□ 1.51
Slc6a20bO88575 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Slc6a20bO88575 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Slc6a20bO88575 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC24.51■■□□□ 1.51
Slc6a20bO88575 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Slc6a20bO88575 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC24.5■■□□□ 1.51
Slc6a20bO88575 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Slc6a20bO88575 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC24.5■■□□□ 1.51
Slc6a20bO88575 AC164433.2-201ENSMUST00000226346 1701 ntBASIC24.49■■□□□ 1.51
Slc6a20bO88575 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Slc6a20bO88575 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Slc6a20bO88575 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Slc6a20bO88575 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC24.49■■□□□ 1.51
Slc6a20bO88575 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Slc6a20bO88575 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Slc6a20bO88575 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Slc6a20bO88575 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Slc6a20bO88575 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC24.48■■□□□ 1.51
Slc6a20bO88575 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC24.48■■□□□ 1.51
Slc6a20bO88575 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Slc6a20bO88575 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Slc6a20bO88575 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
Slc6a20bO88575 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC24.46■■□□□ 1.51
Slc6a20bO88575 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC24.46■■□□□ 1.51
Slc6a20bO88575 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC24.46■■□□□ 1.51
Slc6a20bO88575 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Slc6a20bO88575 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Slc6a20bO88575 Gm7199-201ENSMUST00000118327 1485 ntBASIC24.45■■□□□ 1.51
Slc6a20bO88575 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Slc6a20bO88575 Gm22238-201ENSMUST00000175222 88 ntBASIC24.45■■□□□ 1.5
Slc6a20bO88575 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Slc6a20bO88575 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Slc6a20bO88575 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC24.43■■□□□ 1.5
Slc6a20bO88575 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Slc6a20bO88575 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Slc6a20bO88575 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Slc6a20bO88575 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC24.42■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms