Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.91■□□□□ 0.94
Tnfrsf17O88472 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tnfrsf17O88472 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tnfrsf17O88472 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
Tnfrsf17O88472 Gm12821-201ENSMUST00000120022 600 ntBASIC20.9■□□□□ 0.94
Tnfrsf17O88472 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tnfrsf17O88472 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tnfrsf17O88472 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tnfrsf17O88472 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.9■□□□□ 0.94
Tnfrsf17O88472 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Tnfrsf17O88472 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.89■□□□□ 0.93
Tnfrsf17O88472 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tnfrsf17O88472 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Tnfrsf17O88472 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Tnfrsf17O88472 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.88■□□□□ 0.93
Tnfrsf17O88472 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tnfrsf17O88472 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tnfrsf17O88472 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tnfrsf17O88472 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Tnfrsf17O88472 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tnfrsf17O88472 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tnfrsf17O88472 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.87■□□□□ 0.93
Tnfrsf17O88472 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnfrsf17O88472 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnfrsf17O88472 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.86■□□□□ 0.93
Tnfrsf17O88472 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.86■□□□□ 0.93
Tnfrsf17O88472 Gm12922-201ENSMUST00000120626 809 ntBASIC20.86■□□□□ 0.93
Tnfrsf17O88472 Gm27454-201ENSMUST00000185090 204 ntBASIC20.86■□□□□ 0.93
Tnfrsf17O88472 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnfrsf17O88472 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnfrsf17O88472 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfrsf17O88472 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.85■□□□□ 0.93
Tnfrsf17O88472 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfrsf17O88472 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfrsf17O88472 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfrsf17O88472 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfrsf17O88472 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfrsf17O88472 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfrsf17O88472 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Tnfrsf17O88472 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.84■□□□□ 0.93
Tnfrsf17O88472 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tnfrsf17O88472 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Tnfrsf17O88472 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.84■□□□□ 0.93
Tnfrsf17O88472 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tnfrsf17O88472 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tnfrsf17O88472 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tnfrsf17O88472 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.84■□□□□ 0.93
Tnfrsf17O88472 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tnfrsf17O88472 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tnfrsf17O88472 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tnfrsf17O88472 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.83■□□□□ 0.93
Tnfrsf17O88472 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.83■□□□□ 0.93
Tnfrsf17O88472 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tnfrsf17O88472 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Tnfrsf17O88472 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Tnfrsf17O88472 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tnfrsf17O88472 Gm45417-201ENSMUST00000209533 758 ntBASIC20.82■□□□□ 0.92
Tnfrsf17O88472 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Tnfrsf17O88472 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Tnfrsf17O88472 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Tnfrsf17O88472 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
Tnfrsf17O88472 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfrsf17O88472 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfrsf17O88472 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.81■□□□□ 0.92
Tnfrsf17O88472 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.81■□□□□ 0.92
Tnfrsf17O88472 Gm8495-201ENSMUST00000188740 694 ntBASIC20.81■□□□□ 0.92
Tnfrsf17O88472 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Tnfrsf17O88472 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfrsf17O88472 Zxda-201ENSMUST00000117281 2621 ntBASIC20.8■□□□□ 0.92
Tnfrsf17O88472 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnfrsf17O88472 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Tnfrsf17O88472 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.79■□□□□ 0.92
Tnfrsf17O88472 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tnfrsf17O88472 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tnfrsf17O88472 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tnfrsf17O88472 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.79■□□□□ 0.92
Tnfrsf17O88472 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tnfrsf17O88472 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfrsf17O88472 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfrsf17O88472 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.78■□□□□ 0.92
Tnfrsf17O88472 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tnfrsf17O88472 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Tnfrsf17O88472 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tnfrsf17O88472 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.76■□□□□ 0.91
Tnfrsf17O88472 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tnfrsf17O88472 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Tnfrsf17O88472 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.75■□□□□ 0.91
Tnfrsf17O88472 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
Tnfrsf17O88472 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tnfrsf17O88472 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tnfrsf17O88472 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Tnfrsf17O88472 Gm40881-201ENSMUST00000223397 166 ntBASIC20.74■□□□□ 0.91
Tnfrsf17O88472 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tnfrsf17O88472 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tnfrsf17O88472 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Tnfrsf17O88472 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tnfrsf17O88472 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tnfrsf17O88472 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tnfrsf17O88472 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tnfrsf17O88472 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms