Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Capns1O88456 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Capns1O88456 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Capns1O88456 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Capns1O88456 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Capns1O88456 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Capns1O88456 Notumos-201ENSMUST00000151998 2659 ntBASIC20.31■□□□□ 0.84
Capns1O88456 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Capns1O88456 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Capns1O88456 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Capns1O88456 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.31■□□□□ 0.84
Capns1O88456 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Capns1O88456 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Capns1O88456 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Capns1O88456 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Capns1O88456 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Capns1O88456 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Capns1O88456 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.3■□□□□ 0.84
Capns1O88456 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.3■□□□□ 0.84
Capns1O88456 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.3■□□□□ 0.84
Capns1O88456 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Capns1O88456 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.29■□□□□ 0.84
Capns1O88456 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Capns1O88456 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Capns1O88456 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Capns1O88456 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
Capns1O88456 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Capns1O88456 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Capns1O88456 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Capns1O88456 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Capns1O88456 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
Capns1O88456 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.28■□□□□ 0.84
Capns1O88456 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Capns1O88456 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Capns1O88456 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Capns1O88456 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Capns1O88456 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Capns1O88456 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Capns1O88456 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Capns1O88456 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Capns1O88456 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Capns1O88456 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Capns1O88456 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.26■□□□□ 0.83
Capns1O88456 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.26■□□□□ 0.83
Capns1O88456 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Capns1O88456 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Capns1O88456 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.25■□□□□ 0.83
Capns1O88456 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Capns1O88456 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Capns1O88456 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Capns1O88456 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Capns1O88456 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Capns1O88456 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Capns1O88456 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Capns1O88456 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Capns1O88456 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.23■□□□□ 0.83
Capns1O88456 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Capns1O88456 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.23■□□□□ 0.83
Capns1O88456 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Capns1O88456 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Capns1O88456 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.22■□□□□ 0.83
Capns1O88456 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Capns1O88456 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Capns1O88456 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.22■□□□□ 0.83
Capns1O88456 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Capns1O88456 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Capns1O88456 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.21■□□□□ 0.83
Capns1O88456 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.2■□□□□ 0.82
Capns1O88456 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Capns1O88456 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Capns1O88456 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Capns1O88456 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Capns1O88456 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.19■□□□□ 0.82
Capns1O88456 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Capns1O88456 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Capns1O88456 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Capns1O88456 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Capns1O88456 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.18■□□□□ 0.82
Capns1O88456 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Capns1O88456 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Capns1O88456 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Capns1O88456 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Capns1O88456 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Capns1O88456 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.17■□□□□ 0.82
Capns1O88456 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.17■□□□□ 0.82
Capns1O88456 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Capns1O88456 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Capns1O88456 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Capns1O88456 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Capns1O88456 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Capns1O88456 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.15■□□□□ 0.82
Capns1O88456 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Capns1O88456 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.82
Capns1O88456 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Capns1O88456 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Capns1O88456 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.13■□□□□ 0.81
Capns1O88456 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.13■□□□□ 0.81
Capns1O88456 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Capns1O88456 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Capns1O88456 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms